Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2577 125 4e-27 seq2307 78.8 5e-13 >seq2577 Length=13544 Score = 125 bits (138), Expect = 4e-27 Identities = 103/120 (86%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTT-GATTTCTCGTAAGGTGCC-GAGCGAGTCAAA-ATGATAACATCG 57 ||||||||||||||| |||||||| ||||| ||| ||| |||||| || ||||||| Sbjct 5589 GAACCCAAAGACTTTAGATTTCTCTTAAGGCGCCAGAG-GAGTCATCCATATTAACATCA 5647 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | || ||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 5648 TCTAATTCCTGGTCGGCATCGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5707 >seq2307 Length=90459 Score = 78.8 bits (86), Expect = 5e-13 Identities = 45/46 (98%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 72 GGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 17004 GGCATCGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 16959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278393274030