Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2577 129 1e-27 seq864 105 1e-20 >seq2577 Length=13544 Score = 129 bits (142), Expect = 1e-27 Identities = 179/246 (73%), Gaps = 11/246 (4%) Strand=Plus/Minus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGA 133 |||||||| ||| ||||||||| ||||| || | |||| ||||| |||||||||| Sbjct 5946 TACTTTGAGGAAAATAGAGTGTTTCAAGCATGCATAATTGCATGAATAAATTAGCATGGG 5887 Query 134 ATAATAGAATAGG-ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||| | || | |||| |||| || ||||| || || || | || Sbjct 5886 ATAGTGTTATTTGTACGTTTGGTTTTAG------GGTTTACCCGAGCGTAC-AAGAAGTA 5834 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 |||| ||||| ||||| || |||| || | ||||||||||||||||||||| || Sbjct 5833 ATAGAAATAGTTGGGGGCGTTTATATTTAACAGCTAGAGGTGAAATTCTTGGATTTGTTA 5774 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 | || |||| |||||| || ||| ||||||||||||||||| |||| |||||||||| Sbjct 5773 AGGATACACTAATGCGAAGGCATTCGCCAAGGATGTTTTCATTGATCA-AGAACGAAAGT 5715 Query 313 TAGGGG 318 |||||| Sbjct 5714 TAGGGG 5709 >seq864 Length=2215 Score = 105 bits (116), Expect = 1e-20 Identities = 161/226 (71%), Gaps = 10/226 (4%) Strand=Plus/Plus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGA 133 |||||||| ||| ||||||||| ||||| || | |||| ||||| |||||||||| Sbjct 293 TACTTTGAGGAAAATAGAGTGTTTCAAGCATGCATAATTGCATGAATAAATTAGCATGGG 352 Query 134 ATAATAGAATAGG-ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||| | || | |||| |||| || ||||| || || || | || Sbjct 353 ATAGTGTTATTTGTACGTTTGGTTTTAG------GGTTTACCCGAGCGTAC-AAGAAGTA 405 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 |||| ||||| ||||| || |||| || | ||||||||||||||||||||| || Sbjct 406 ATAGAAATAGTTGGGGGCGTTTATATTTAACAGCTAGAGGTGAAATTCTTGGATTTGTTA 465 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 | || |||| |||||| || ||| ||||||||||||||||| || Sbjct 466 AGGATACACTAATGCGAAGGCATTCGCCAAGGATGTTTTCATTGAT 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915176415296