Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2577 176 2e-41 >seq2577 Length=13544 Score = 176 bits (194), Expect = 2e-41 Identities = 138/164 (84%), Gaps = 1/164 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| |||||| |||||| | || |||||||||||| ||||||||||||||| Sbjct 3923 GAGTCGCGTTGCTTGGGAGTGCAGCGCAAAGTGGGAGGTAAATAGCTTCTAAAGCTAAAT 3864 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||| |||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 3863 ATTAGTTAGAGATCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 3804 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||||||| ||||||||||||||||| | |||||||| ||| Sbjct 3803 AGAGAGTT-AAAAGCACGTGAAATTGATATTGGGGAAGCGATTG 3761 Score = 161 bits (178), Expect = 4e-37 Identities = 212/288 (74%), Gaps = 13/288 (5%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG-TGTCAAAC 466 ||||||||| ||||||||||||||||| ||||| || || ||||||| || | |||| Sbjct 3444 CCCGTCTTGAAACACGGACCAAGGAGTGCAACATATACGCAAGTGTTTAGGATAAGAAAC 3385 Query 467 CCG-TGCGCGTAATGAAAGTGA-----ACGGAGGT---GGGAACCCGTGAGGGTGCACCA 517 || | |||||||| || ||| | | || | | || ||| || ||| | Sbjct 3384 CCTATTCGCGTAATAAACGTGTTAAGTAAGAAGTTTACGTTTACGCGT-AGATGGCATTA 3326 Query 518 TCGACCGATCCTGATGTCTT--CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCG 575 ||||| || |||| | | || || |||| |||| || |||||| |||||| Sbjct 3325 CTGACCGGCCCGGATGCAATGCCAGAAGGGACCGAGTTCGAGCGTATCTGTTGCGACCCG 3266 Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635 |||||| | ||||||| | || |||| |||||||||||||||||||||||| | || Sbjct 3265 AAAGATAGCGAACTATACTTGGGTAGGTCGAAGCCAGAGGAAACTCTGGTGGAAGACCGA 3206 Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| |||||||||||||||||||||| |||||| ||||| Sbjct 3205 AGCGGTTCTGACGTGCAAATCGATCGTCAAATTCAAGTATAGCGGCGA 3158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079944723350