Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2577 145 1e-32 >seq2577 Length=13544 Score = 145 bits (160), Expect = 1e-32 Identities = 103/117 (88%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||||||| |||||||||||||||||||| |||||| ||||||||||| ||||||| Sbjct 5347 CTATTTAGCAGACTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCAATCCACCA 5406 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||| |||| ||||| | || || ||||| Sbjct 5407 ACTAAGAACGGCCATGCACCACCACCCATCAAATCTTGAAAG-GTCATTAACCTGTC 5462 Score = 100 bits (110), Expect = 5e-19 Identities = 57/58 (98%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5156 CATTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 5213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796780108137