Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2577 408 1e-111 >seq2577 Length=13544 Score = 408 bits (452), Expect = 1e-111 Identities = 365/450 (81%), Gaps = 12/450 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||||||| ||| ||||||| ||| |||| | ||||||||||||| ||| | Sbjct 1238 CTTTTACTCTACATGAGGTTTCTGTCCTCATTGAGCTCATCTTAGGACACCTGTGTTGTA 1297 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 || ||||||||||||||||||||||||||||||||||||| ||||| | ||| ||| Sbjct 1298 GTCTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGATTATGTCTTTAACATTAATC 1357 Query 127 GGCCC-GCGAAGG----ACCTT--AACGCCAGAAAATG-GTCGGTGAAGACCAGTTCCGC 178 || | || | ||| || |||||||| ||| | | | | || | Sbjct 1358 AACCATGATAAATCATAATCTTTCAAATCCAGAAAAACTGTCTCTCGACAGCTCTTAAAC 1417 Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCT 238 | ||| | |||||| || | || | |||||||||||||||| | || | || || Sbjct 1418 CT-ATTAAATAAGTAGAATATCGTTCGGGGTAGTGGTATTTCATTGACG--GTTACC-CT 1473 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| ||||||| | ||| |||| |||||| || |||||||||||||||||||| Sbjct 1474 CCCACTTATGCTACACCCCCGAAGACATTCCACAAAATCAGACTAGAGTCAAGCTCAACA 1533 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| || Sbjct 1534 GGGTCTTCTTTCCCCGCTAATTATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAAAT 1593 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1594 AGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 1653 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||||||||||||||||||||||||| Sbjct 1654 GAGGCATTTGGCTACCTTAAGAGAGTCATA 1683 Score = 107 bits (118), Expect = 6e-21 Identities = 76/86 (88%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 ||||||||| ||| |||||||||||||| || |||| ||||||||| |||||||||||| Sbjct 1784 CCCGCCGTTGACCTGCGCTTGGTTGAATCTCATCACATTGACATTCGAAGCACTGGGCAG 1843 Query 515 AAATCACATTGCGTCAACATCACTTT 540 ||||||||||||||| | ||| |||| Sbjct 1844 AAATCACATTGCGTCGATATC-CTTT 1868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635157860896