Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2577 288 3e-75 >seq2577 Length=13544 Score = 288 bits (318), Expect = 3e-75 Identities = 378/516 (73%), Gaps = 52/516 (10%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGT-ATCAGTATTTATTGTCACTACCTC 61 ||||||| ||||| | |||| | |||||| | | || | ||||| ||||||||||||| Sbjct 6179 ACTCATTGCAATTGCCAGACTCTAAAGAGTCAAGGCATTACTATTTCTTGTCACTACCTC 6238 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | || | | ||||||||||||||||||||||||||||||||| || ||||| ||| ||| Sbjct 6239 CTCGAATTGAGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGAAGTGGTGGCCATTT 6298 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||| ||||||||||||||||||||| |||||||||||||||| || |||| ||||| Sbjct 6299 CTCAGGCCCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTCGAAACCACGGTAG 6358 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||||| ||||| || ||||||||||||||||||| | || | |||| | | Sbjct 6359 TCCACTACACTACCGTCAAAAGTTGATAGGGCAGAAAATCAAAAGGCACATCAC-----C 6413 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 || || || || ||| | |||| |||| |||| | Sbjct 6414 AA---CA----------TAGGTGATTGCGTATCA--AAGG-------------GTTGTTC 6445 Query 302 TTTTATCTAATAAATACA---CCCCTT--CCG--AAGTCG---GGGTT--TTTAGCAT-G 348 || || | || | |||||| || || ||| | ||| ||| |||| | Sbjct 6446 ATTAGAAAAAGGATTAAAGTTCCCCTTTGACGTAAACTCGTGAGAGTTTATTTTGCATCG 6505 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 |||||||||||||||||| || ||||||| ||| ||| || | | || | ||| Sbjct 6506 TATTAGCTCTAGAATTACTACAGTTATCC--GTAATAAAATA--ACCTTTTAGATTTTAA 6561 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||||||||||||| | |||| || ||| | || || |||| ||||||| |||||| Sbjct 6562 CTGATTTAATGAGCCGTCTGCAGATTTACTAT-TAACTTATTTATTCTTAGACTTGCATG 6620 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||| ||||||||||||||||||| Sbjct 6621 GCTTAATCTTTGAGACGAGCATATGACTACTGGCAG 6656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510361076992