Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq972 129 2e-27 seq3 129 2e-27 >seq972 Length=7629 Score = 129 bits (142), Expect = 2e-27 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||| ||||||||||| |||||||||||||||||| | ||||||||| | |||||| | Sbjct 3276 CTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGAAGCCCGGGGAAACCCA 3217 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||| | |||| | ||| ||||||||||| |||| |||||||||| || ||| Sbjct 3216 GGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGTATGATTTGGGTATCGGAGCG 3157 Query 683 A 683 | Sbjct 3156 A 3156 Score = 111 bits (122), Expect = 7e-22 Identities = 109/137 (80%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||||||||||||||| || | ||| ||||| | ||| |||||| |||||| | | Sbjct 3793 TGTTTGGGAATGCAGTGTCAAGCTGGCAGGTATTTGTCTGCTAAAGTTAAATACAGAGTA 3734 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 3733 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 3674 Query 165 GTTAAAAAGCACGTGAA 181 || | | || || |||| Sbjct 3673 GTGACATAGAACCTGAA 3657 >seq3 Length=8480 Score = 129 bits (142), Expect = 2e-27 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||| ||||||||||| |||||||||||||||||| | ||||||||| | |||||| | Sbjct 3786 CTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGAAGCCCGGGGAAACCCA 3727 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||| | |||| | ||| ||||||||||| |||| |||||||||| || ||| Sbjct 3726 GGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGTATGATTTGGGTATCGGAGCG 3667 Query 683 A 683 | Sbjct 3666 A 3666 Score = 111 bits (122), Expect = 7e-22 Identities = 109/137 (80%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||||||||||||||| || | ||| ||||| | ||| |||||| |||||| | | Sbjct 4303 TGTTTGGGAATGCAGTGTCAAGCTGGCAGGTATTTGTCTGCTAAAGTTAAATACAGAGTA 4244 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 4243 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 4184 Query 165 GTTAAAAAGCACGTGAA 181 || | | || || |||| Sbjct 4183 GTGACATAGAACCTGAA 4167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079628078450