Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq11930 134 2e-29 >seq11930 Length=2380 Score = 134 bits (148), Expect = 2e-29 Identities = 184/253 (73%), Gaps = 7/253 (3%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| |||||||||||||||| || ||||| ||||||| |||||| ||| Sbjct 1914 CTTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCGACTT-TCGTCTTTGCAG 1972 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | || |||||||| ||||||||||| || | ||| |||||| || | | ||| Sbjct 1973 AGTGCTATGTTTTTAATAAACAGTCGCAGCCACCGATTATCTGCGGCCTCTTCATGCTTT 2032 Query 121 ACACG-TCGTTCACCAGCA----GTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTG 175 || | ||| || | | |||| ||||||||||||||||||| || |||| Sbjct 2033 GAGCGCAAGCTCATCACAATAATGAGGCATACCTTCTCCCGAAGTTACGGTATCAATTTG 2092 Query 176 CCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTG 235 |||| |||||| || ||||| | | | |||||||| || || || | |||||||| Sbjct 2093 CCGAGTTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATATTCATCCCG-TCACCTGTG 2151 Query 236 TCGGTTTACGGTA 248 ||||||| ||||| Sbjct 2152 TCGGTTTGCGGTA 2164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694283360547