Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq11930 165 3e-38 >seq11930 Length=2380 Score = 165 bits (182), Expect = 3e-38 Identities = 195/264 (74%), Gaps = 20/264 (8%) Strand=Plus/Plus Query 302 GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTA-CTGCAATTTCACCGG 360 |||||||| |||| |||||| | | ||||| | || | || ||| ||| | | Sbjct 1712 GGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACAACTTCAACTTCGCTGA 1771 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | || || ||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 1772 GTCTCAGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 1831 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 1832 ACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCG 1891 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 || | | || ||| ||| ||| ||||||||||| ||||||| Sbjct 1892 ATCAAGAG-CTTGCACCCCA----------TCA--------CTTAACCTTCCGGCACCGG 1932 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 |||||||||| || ||||| ||| Sbjct 1933 GCAGGCGTCACACCCTATACGTCG 1956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702104820864