Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq676 147 7e-33 >seq676 Length=7547 Score = 147 bits (162), Expect = 7e-33 Identities = 119/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||| ||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 5887 ATTGGGCAATTTACGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 5946 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 5947 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 6005 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 ||||| ||| ||||||||||| Sbjct 6006 GCCATCACAAGCTGATAGGGCAG 6028 Score = 84.2 bits (92), Expect = 7e-14 Identities = 79/98 (81%), Gaps = 6/98 (6%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC--TTATACTTAGACATGCA 466 ||||| ||||||||||| ||||| ||| ||| | | ||| | || || || |||||| Sbjct 6248 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAAA---TGCAGTGATTCTGAGGCATGCA 6303 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| | || |||| |||||||||||||||||||||| Sbjct 6304 TGGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 6341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510315175936