Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1045 374 3e-101 >seq1045 Length=5793 Score = 374 bits (414), Expect = 3e-101 Identities = 302/363 (83%), Gaps = 4/363 (1%) Strand=Plus/Plus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||| | | || ||||||||||| |||||| || Sbjct 1876 CTTCATTCGATAAGTGAAGCAACGTTCCGAGTGGTGGTATTTCATTTGCGCTTGC---GC 1932 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 1933 TTCCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 1992 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 1993 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 2052 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 2053 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 2112 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 2113 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGG 2172 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA-ACATCA 536 ||||| || |||| ||||||||||||||||||||||||||||| ||||| || ||| || Sbjct 2173 TGAATCTCGTCACGTTGACATTCAGAGCACTGGGCAGAAATCAGTTTGCGACATACACCA 2232 Query 537 CTT 539 ||| Sbjct 2233 CTT 2235 Score = 111 bits (122), Expect = 5e-22 Identities = 90/108 (83%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || || ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 1613 CTTGTGTTCCACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 1672 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 1673 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 1720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635069952544