Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1848 150 5e-34 >seq1848 Length=3473 Score = 150 bits (166), Expect = 5e-34 Identities = 120/143 (84%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 1664 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 1723 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 1724 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 1782 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 ||||| ||| ||||||||||| Sbjct 1783 GCCATCACAAGCTGATAGGGCAG 1805 Score = 84.2 bits (92), Expect = 7e-14 Identities = 79/98 (81%), Gaps = 6/98 (6%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC--TTATACTTAGACATGCA 466 ||||| ||||||||||| ||||| ||| ||| | | ||| | || || || |||||| Sbjct 2024 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAAA---TGCAGTGATTCTGAGGCATGCA 2079 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| | || |||| |||||||||||||||||||||| Sbjct 2080 TGGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 2117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510279877888