Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3286 196 4e-45 seq753 185 7e-42 >seq3286 Length=1922 Score = 196 bits (216), Expect = 4e-45 Identities = 583/886 (66%), Gaps = 19/886 (2%) Strand=Plus/Plus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGA- 61112 || ||||| ||||||| ||| |||| | || || ||| | |||||| || ||| Sbjct 659 CGCTTCGTGCTGTTCCCGATCCAGTACCACGACATCTGGAAGAAGTACAAGGAGCAGGAG 718 Query 61113 AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGC- 61171 |||| | | ||||||| |||||||| ||||| || || ||| ||| |||||| || Sbjct 719 AGCTGCAT-CTGGACGCTGGAGGAGATCGATCTGGGAAATGACCTGACGGACTGGAAGAA 777 Query 61172 GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGG 61231 | | | ||| || || || || ||||| || | ||| | || ||||| || | | Sbjct 778 GATGACGGAG-GGCGAGCAGCACTTCATCAAGTACGTGCTTGCCTTCTTCGCTGGCAGCG 836 Query 61232 ACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGG 61291 |||| ||||| | |||||| | | | || ||| | ||| || | ||| |||||| Sbjct 837 ACGGCATCGTGATTGAGAACCTCGCGCAGCGCTTCATGTCGGACGTCAAGGTGCCGGAGG 896 Query 61292 CGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTG 61351 | ||| ||||||||||||||| | |||||||| ||||||| |||| ||| || Sbjct 897 CCCGTGCGTTCTACGGCTTCCAGCTGATGATGGAGAACATCCACTCCGAGACCTACTCTG 956 Query 61352 TTCTCATCGATACGTACATCAGGG--AGCGGGCGGAACGTGAACGATTGTTCAATGCCAT 61409 | || | || |||||||||| || |||| | ||| |||| || | | || || Sbjct 957 TGCTGCTGGACACGTACATCACGGACAGCGAGGAGAAGCTGAA--GCTGCTGCACGCGAT 1014 Query 61410 CGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTAC 61469 | ||||||| ||| | || ||| ||||| ||||| | |||||| || | Sbjct 1015 CCAGACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGCGCTGGATCGGAAG--C 1072 Query 61470 AACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAG 61529 | ||| | || || || |||| | ||||||| ||| ||||| | || ||| Sbjct 1073 GA-GGCGAGCTTCCAGGAGCGCCTGCTCGGGTTTGCGGCGGTGGAGGGCATCTTCTTCTC 1131 Query 61530 TGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTT 61589 || || || ||| ||||| ||| ||||||| || || | |||||||| |||||||| Sbjct 1132 CGGCTCCTTCTGCGCGATCTTCTGGCTGAAGAAGCGCGGCGTGATGCCCGGCCTGACCTT 1191 Query 61590 CAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATT 61649 |||||| ||| |||| || || |||||||| |||| || ||||| |||| | Sbjct 1192 CAGCAACGAGCTGATTTCCCGTGACGAGGGTCTGCACACGGACTTTGCGTGCCTGCTGTA 1251 Query 61650 CAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGC 61709 ||| || | | ||| | |||| ||||| ||| | || | || || Sbjct 1252 CAACAGCCACATCAAGAACAAGCTGTCGCGCGAGCGCGTGCTGAACATCATCACCGATGC 1311 Query 61710 GGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATG 61767 || ||||| |||| || |||| || | | ||||| || || || ||| Sbjct 1312 CGTGGACATCGAGAAGGAGTTCATCTG--CGAGTCCCTCCCCGTGCGCCTGATTGGTATG 1369 Query 61768 AATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTG 61827 || | | | ||| ||||| ||||| || || || ||||||||| ||||| | Sbjct 1370 AACTCGGAGATGATGAGCCAGTACATTGAGTTCGTGGCGGACCGTCTGCTGGTCTCCCTT 1429 Query 61828 GGTATGAAGCG--GATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGC 61885 || || ||| | ||| || ||| ||||| || || |||||||| ||||| || | Sbjct 1430 GG--CGAGGCGAAGCACTACAACGCGACGAACCCCTTCGACTTCATGGAGATGATCTCCC 1487 Query 61886 TGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | ||||||||| || || |||||||| || || ||||| || Sbjct 1488 TCCCTGGCAAGACCAACTTCTTCGAGAAGAAGGTTGGTGACTACCA 1533 >seq753 Length=7390 Score = 185 bits (204), Expect = 7e-42 Identities = 506/770 (66%), Gaps = 4/770 (1%) Strand=Plus/Plus Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 ||| ||||| | || || | |||||| || || ||||||| ||| ||||| | Sbjct 3381 GGGGAGGGCGATGGAGGCCAAGTTGCACACCGCCGTCTCGTCCTTGCTGGTGTACTCCAT 3440 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120 ||| ||||||||||| || ||| |||||||||| ||| | || || ||| || Sbjct 3441 AATCTCGGTGCACAGGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCG 3500 Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 ||||| | |||||||||| |||| | || |||||||| || |||||||| | || Sbjct 3501 GTTGCAAGAGTCCTTGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAAT 3560 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATG 66240 |||| ||| || | | || | || || | || ||| | | ||||| | Sbjct 3561 GGCGAACCACAGCTCTTGCGCGGCGATGGTGCGGATGCCCAGACCCTGTCTCTCGTACTC 3620 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 ||||| | || || || || ||| ||| | | || | || || Sbjct 3621 CTCGTACTTCTTCTCAAACTCCTCGCCGTGGCAGTCGCTCAGGCCGGTGCAGATATGGGG 3680 Query 66301 ACACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359 |||||||| ||| | || || || || ||||| ||| || ||||| || |||| Sbjct 3681 GTCCATCAGCGTCCACTTGCCCTCGCTCTTG-ACACGCTTCATGAAGAGATCGGGGATCC 3739 Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419 ||||||||||||||||||| || || || | ||||| | ||| | || || || Sbjct 3740 AGAGGGCGTAGAAGAGATCACGGGCACGGTTGTCCTCCTTACCG-GTGTTACGCTTCAGG 3798 Query 66420 CGA-GGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || |||||||||| |||||||| ||||| || || ||||||| ||| || | ||| | Sbjct 3799 AGAAGGAACTCAAAAATGTCGGCGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCTTT 3858 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 | || ||||| || ||||||||||| || ||| ||| || | || || | |||||| Sbjct 3859 CTCTTACCGCCGCCCTGGTCGACGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGC 3918 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 || | ||||| || | || ||||| || | ||| ||| | || || | | Sbjct 3919 ACTAAACCGTTCGACGTCCCGTTGGTACCCGCAATGTAACTTCCGGCGGAACGAATGTTG 3978 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTC 66658 || || | | ||| || |||||||| | ||| |||| || || || || || Sbjct 3979 TGCACGTGGAAACCGATGCCACCGGCAGACTTGCTGATGATGGCGCATTCCTTCAGCGTA 4038 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | ||||| || || ||| |||| |||| | | | |||| ||||| | || Sbjct 4039 TCGTAGATGCCCTCGATACTGTCGTCCTTCATGGCAACCAAGAAGCAAGAACTCATCTGA 4098 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA 66768 || ||||| || |||| |||||||||||| || ||||| || ||||| Sbjct 4099 GGGTTGGGGGTACCGGCGTTGAAGAGGGTGGGGGTGGCGTGGGTGAAGTA 4148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397529464851920