Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1033 351 2e-94 >seq1033 Length=3252 Score = 351 bits (388), Expect = 2e-94 Identities = 279/333 (84%), Gaps = 2/333 (1%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| |||||| |||||||||| |||||| ||| | | ||||||||||||||||| | Sbjct 2233 CCCGAACAGGGGAGTGAAATAGAACCTGAAACCGTGTACTTACAAGCGGTCGGAGCCTGG 2292 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | | ||||||||||||||||||||||||||||||||||||||| || || | || || Sbjct 2293 TAACG-GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTCTTCCCTGGCAAG 2351 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 |||||| | || || | || | |||||| ||||||||| || || |||||| ||| Sbjct 2352 GTTAAGTGTTTAAGACACGG-ATCCGAAGCGAAAGCGAGTCTGAAAAGGGCGTATAGTCA 2410 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 | || | ||||||||||||||||||||||||||| | ||||||||||| || ||||| Sbjct 2411 GGGGAGGTAGACGCGAAACCTTGTGATCTACCCATGGGCAGGTTGAAGGTGCCGTAACAG 2470 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 || ||||||||||||||| ||||||||||||||||| ||||||||| | |||||||||| Sbjct 2471 GTACTGGAGGACCGAACCGATAAACGTTGAAAAGTTTCCGGATGACTTGTGGGTAGGGGT 2530 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 ||||||| ||||||||||||||||||||||||| Sbjct 2531 GAAAGGCTAATCAAACTGGGAAATAGCTCGTAC 2563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972778053632