Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1033 129 6e-28 >seq1033 Length=3252 Score = 129 bits (142), Expect = 6e-28 Identities = 137/177 (77%), Gaps = 13/177 (7%) Strand=Plus/Plus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 |||| |||||||| ||||||| ||||||| ||||||||||||||||||||| ||| || Sbjct 1752 ACGGGGGATGCCTTGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGATAAGTACCG 1811 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACC-CGATATATTGG 124 |||||| ||| ||| || |||||||| || ||||||||||| |||| | ||| ||| Sbjct 1812 GGGATTTGCAAATAAGATTTGATCCGGTAATTTCCGAATGGGGAAACCTAGTTAT-TTGA 1870 Query 125 AGATATATCATAACGCTAGGCGTTAG-GCGAACGTGGGGAACTGAAACATCTAAGTA 180 ||| ||||| || ||| || ||| || ||||||||||||||||||| Sbjct 1871 AGA------ATAAC----TGCAATAGCGCTAACCTGCCGAACTGAAACATCTAAGTA 1917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476789579536