Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1033 354 2e-95 >seq1033 Length=3252 Score = 354 bits (392), Expect = 2e-95 Identities = 372/479 (78%), Gaps = 14/479 (3%) Strand=Plus/Plus Query 24 AAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCG 83 ||||||||||||||| ||||||||||||| ||||||||||||||||||||| | ||||| Sbjct 1 AAGGAATTGACGGGGGCCCGCACAAGCGGAGGAGCATGTGGTTTAATTCGATGATACGCG 60 Query 84 AAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCC--CTT 141 | |||||||||| ||||| | ||| | | || | ||| || | ||| Sbjct 61 AGGAACCTTACCCGGGCTTGAAAGTTAGTGAA---TGT-GACAGAGACGTCACAGTTCTT 116 Query 142 CGGGGGACAGAGTGAC-AGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGG 200 ||| || | || ||||| ||||||| ||||||||||||||| |||||| |||||| Sbjct 117 CGGAACACGAA---ACTAGGTGCTGCATGGCTGTCGTCAGCTCGTGCCGTGAGGTGTTGG 173 Query 201 GTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCA-TTAAGTTGGGCACT 259 |||||||||||||||||||||||||| || | |||||||||| || ||||| |||| ||| Sbjct 174 GTTAAGTCCCGCAACGAGCGCAACCCCTATGTTTAGTTGCCAGCATTTAAGGTGGGGACT 233 Query 260 CTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGGGACGACGTCAAATCATCATGC 318 |||| ||||||| || |||| | |||||||| |||||||||||||| |||||||| Sbjct 234 CTAAACAGACTGCCTATG-CAAATAGAGAGGAAGGAGGGGACGACGTCAAGTCATCATGG 292 Query 319 CCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGC 378 |||||| | |||||||||||||||||||||||| |||| ||||| || | || Sbjct 293 CCCTTACGTCCGGGGCTACACACGTGCTACAATGGATGGTACAGAGGGCCGCTACCTGGC 352 Query 379 GAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTA 438 | | || |||| | ||||| ||| |||||||||| | |||||||||||||| Sbjct 353 AACAGGATGCCAATCTCTTAAAGCCATTCACAGTTCGGATCGGGGTCTGCAACTCGACCC 412 Query 439 TATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTGAATACGTTCCCG 496 ||||| |||| ||||||||||||| |||||| ||| ||||||||||||||||| Sbjct 413 CGTGAAGTTGGATTCGCTAGTAATCGCGTATCAGCAATGACGCGGTGAATACGTTCCCG 471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503966069760