Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1256 241 2e-61 seq566 98.7 2e-18 >seq1256 Length=4999 Score = 241 bits (266), Expect = 2e-61 Identities = 169/189 (89%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCAT 130 ||||||| ||||||| |||| || ||| |||||||||||||||||||||| | ||| Sbjct 1752 GCCTCAACCTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGCGTACTGCCAA 1694 Query 131 AGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 || | || |||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 1693 AG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAA 1635 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| | Sbjct 1634 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCT 1575 Query 250 CAATCTGTC 258 ||||||||| Sbjct 1574 CAATCTGTC 1566 >seq566 Length=6505 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 2537 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 2478 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || | ||| ||||||| | |||||||||| Sbjct 2477 CCACCATTCAAGGGATCGAGAAAGAACACTCAATCTGTC 2439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796782585936