Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1033 306 1e-80 seq1032 87.8 7e-15 >seq1033 Length=3252 Score = 306 bits (338), Expect = 1e-80 Identities = 349/465 (75%), Gaps = 19/465 (4%) Strand=Plus/Minus Query 131 CGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCC 190 ||| | |||| |||||| |||||||||||| || |||||| | ||||||||| ||| Sbjct 2594 CGCCAGGCTGTTCCTAAAAACATTTCGGGGAGTACGAGCTATTTCCCAGTTTGATTAGCC 2535 Query 191 TTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCA 250 ||||||||||| ||||| ||||||| | |||||||| | | |||||||||||||| Sbjct 2534 TTTCACCCCTACCCACAAGTCATCCGGAAACTTTTCAACGTTTATCGGTTCGGTCCTCCA 2475 Query 251 CGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGAT 310 | |||| ||||||||||||||||| |||||||| | |||| |||| | Sbjct 2474 GTACCTGTTACGGCACCTTCAACCTGCCCATGGGTAGATCACAAGGTTTCGCGTCTACCT 2415 Query 311 CGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC----CCCACACGGG 366 | ||| ||||||||| ||| |||||||||||||| ||| | | | | || Sbjct 2414 CCCCTGACT-ATACGCCCTTTTCAGACTCGCTTTCGCTTCGGATCCGTGTCTTAAAC-AC 2357 Query 367 TTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426 ||||||| || | || |||||| ||||||||| | ||||||||||||||||||| Sbjct 2356 TTAACCTTGCCAGGGAAGAGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCC 2297 Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTT 486 | |||| || |||||||| | ||||| | ||| |||||||||| |||||| Sbjct 2296 GTTACC----AG--------GCTCCGACCGCTTGTAAGTACACGGTTTCAGGTTCTATTT 2249 Query 487 CACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCA 545 |||||||| | ||||| ||||||||||||||||||||||||| || | ||||||||| Sbjct 2248 CACTCCCCTGTTCGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCT 2189 Query 546 CCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 | |||||||||||| |||| ||| |||| ||| || |||| ||| Sbjct 2188 CTCAGGAGTATTTAGCCTTACCGGATGGTGCCGGCAAATTCCCAC 2144 >seq1032 Length=2514 Score = 87.8 bits (96), Expect = 7e-15 Identities = 137/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||| ||||| |||| | ||||| |||| | |||| || ||| || ||||||| Sbjct 1812 GACGACGGACCTTAG-CACCCGCCGTCTGTCTGCCGGACTAG-ACTCGTTGGTATTCGGA 1755 Query 63 GTTTGGTTGATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCGG 121 |||||||| | | |||| | || | | |||| | |||||||||||||||||| || Sbjct 1754 GTTTGGTTAGTATTGGTAGATCTCGCGACCCCCGCA-ACCATCCAGTGCTCTACCCCCAA 1696 Query 122 GAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTT 181 ||| | ||||||| |||| ||| |||||| |||||||||||||| | | | Sbjct 1695 CGGCAAATATCCGACGCTCTACCTCAATAGATTTCGCGGAGAACCAGCTATTTCCCGGCT 1636 Query 182 TGATTGGCCTT 192 ||||||||||| Sbjct 1635 TGATTGGCCTT 1625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817558994944