Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1033 269 7e-70 >seq1033 Length=3252 Score = 269 bits (298), Expect = 7e-70 Identities = 310/402 (77%), Gaps = 20/402 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||| ||||||| ||||| | |||||||||||||||||| | ||| Sbjct 2522 CCACAAGTCAT-CCGGAAACTTTT-CAACGTTTATCGGTTCGGTCCTCCAGTACCT-GTT 2466 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 || ||||| |||||||||||| || |||||| | ||||| || ||||| |||| Sbjct 2465 ACGGCACCTT-CAACCTGCCCATGGG-TAGATCACAAGGTTT-CGCGTCTACCTCCCCT- 2410 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC----CCTATTCGGTTAAGC 184 ||||| ||||||| | ||||||||||| |||| || ||| | || | |||| | Sbjct 2409 GACTATACGCCCTTTTCAGACTCGCTTT-CGCTTCGGATCCGTGTCTTAAACACTTAACC 2351 Query 185 TTTGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCA--AC 241 || |||| ||| | ||| ||| | | |||||| ||||||| |||| ||||||| || Sbjct 2350 TT-GCCAGGGAAGAGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCGTTAC 2292 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCC 301 | |||||| || ||||||| | | ||||||||||| |||||||||||||||| | | Sbjct 2291 CA----GGCTCCGACCGCTTGTAAGTACACGGTTTCAGGTTCTATTTCACTCCCCTGTTC 2236 Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 |||||||||||| |||||||||||||||||| |||||||||||||| |||| ||||||| Sbjct 2235 GGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTT 2176 Query 362 AGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTC 403 |||||| ||||||| || || |||| |||| | |||| Sbjct 2175 AGCCTTACCGGATGGTGCCGGCAAATTCCCACAAGGCGTCTC 2134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241571989504