Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1033 129 1e-27 seq1032 87.8 3e-15 >seq1033 Length=3252 Score = 129 bits (142), Expect = 1e-27 Identities = 181/249 (73%), Gaps = 24/249 (10%) Strand=Plus/Plus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| || |||||||||||| | | |||||||||||||||| || ||||||||| Sbjct 1750 ACACGGGGGATGCCTTGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGATAAGTAC 1809 Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT 125 |||||| | ||||| | ||||||||| ||||||||||||||||||| Sbjct 1810 CGGGGA-TTTGCAAATAAGATTTGATCCGGTAATTTCCGAATGGGGAAACC--------- 1859 Query 126 GGGTCATTGCATGCTGAATACATAGGTATGCAA-AGCG--AACGCGGCGAACTGAAACAT 182 || ||| || ||||| ||||| |||| ||| | ||||||||||||| Sbjct 1860 TAGTTATT---TGAAGAATA------ACTGCAATAGCGCTAACCTGCCGAACTGAAACAT 1910 Query 183 CTAAGT-AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATG 241 |||||| ||| | ||||| ||||| ||| | |||| ||| ||||||||||||||||||| Sbjct 1911 CTAAGTAAGCAG-AGGAAGAGAAAACAATAGTGATTTCCAGAGTAGTGGCGAGCGAAATG 1969 Query 242 GGATGAGCC 250 | | |||| Sbjct 1970 GAAGAAGCC 1978 >seq1032 Length=2514 Score = 87.8 bits (96), Expect = 3e-15 Identities = 92/120 (77%), Gaps = 7/120 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||| |||||||||| ||||||||||||||||||| | | ||||||| Sbjct 1090 AGGGCATCTGGTGAATGCCTTGGCATGTACAGGCGATGAAGGACGTGGCACGCTGCGATA 1149 Query 61 AGCTGCGGGGA---GTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| ||||| |||||||| ||||||||| |||||||||||||| ||||| Sbjct 1150 AGCGTGGGGGAGCTGTGAGCAA----GCTTTGATCCCGCGATTTCCGAATGGGATAACCC 1205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918379280896