Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq133 116 2e-20 seq167 102 3e-16 >seq133 Length=39883 Score = 116 bits (128), Expect = 2e-20 Identities = 188/266 (71%), Gaps = 7/266 (3%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| || || ||| || ||||| ||||||| ||| ||| ||||| | | Sbjct 4656 GTCATGCGGGAGGGAATGGCGTGGGGGTTGATGATGAGGTCCGGCACGACGCCGTCGCGG 4597 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| || || | | ||||||| ||||||||| ||||| ||| Sbjct 4596 TTGAAGGGCATGTCCTCCTGGCGGAACTGAATGCCGTTGGTGCCCTTCTGCCCGTGCCGG 4537 Query 449126 CTGCAGAACTTGTC-CCCCTGCTCGGGCTTGCGTG-TGAAGCGCAGCACGATCTTGATGG 449183 |||||||||||||| || || | ||| | | || || ||| | | | |||| || Sbjct 4536 CTGCAGAACTTGTCGCCGATGTTGGGGAT--CTTGATGGTGCGGATCTTCACCTTGGTGA 4479 Query 449184 AGCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGACTCCACGACGGCGTCGTCGGTGC 449243 ||||| ||||| |||| | || || ||| |||||||||| | | |||||| Sbjct 4478 AGCGGTCGCCGT---TGTTCATCGTCAGCATCACCTTCTCCACGACGCCCTTCTCGGTGG 4422 Query 449244 CGCGGTAGATGGTGCTGCTGTCGTGC 449269 |||| || || ||||| |||| || Sbjct 4421 TGCGGGAGGTGATGCTGGCGTCGCGC 4396 >seq167 Length=36551 Score = 102 bits (112), Expect = 3e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||| || |||| || | |||||||||||||| ||||| || || |||| | || Sbjct 6998 GTCATACGGCTCGGGAAGCCGTGCGGGTTCATGATCATGTCAGGGCTCATGCCGCGCTCG 7057 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||| ||||| ||| | ||| | | |||||| |||||||||||||||||||||| Sbjct 7058 TTGAATGGCATATCCACACCGTTCGCAATGAGGCCGACGACGCCCTTCTGGCCGTGGCGG 7117 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGG 449151 |||||||||| ||| |||| || Sbjct 7118 GACGAGAACTTGTCGCCCGGCTCCGG 7143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084596943911802