Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq133 86.0 2e-11 >seq133 Length=39883 Score = 86.0 bits (94), Expect = 2e-11 Identities = 134/183 (73%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 364392 CCACCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGA 364451 |||||||| ||| | |||| ||||| | | | ||||| || |||||||||| | Sbjct 4694 CCACCTTGCCGGCGAGGGTCTCGATGAGGTGGGCCACCGTCATGCGGGAGGGAATGGCGT 4635 Query 364452 GAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCGG-TAAAGGGCATAT-CTTCGGG 364509 | ||||||||||||| ||| ||||| | |||||| |||| | |||||||| | || | || Sbjct 4634 GGGGGTTGATGATGAGGTCCGGCACGACGCCGTC-GCGGTTGAAGGGCATGTCCTCCTGG 4576 Query 364510 AGGAAC-GATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCA-AACTTGTCGCCA 364567 ||||| || | || |||| ||||| ||| | | || | ||| ||||||||||| Sbjct 4575 CGGAACTGA--ATGCCGTTGGTGCCCTTCTGCCCGT-GCCGGCTGCAGAACTTGTCGCCG 4519 Query 364568 ATG 364570 ||| Sbjct 4518 ATG 4516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884760843593707