Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq906 129 2e-27 >seq906 Length=4881 Score = 129 bits (142), Expect = 2e-27 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||| ||||||||||| |||||||||||||||||| | ||||||||| | |||||| | Sbjct 3204 CTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGAAGCCCGGGGAAACCCA 3145 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||| | |||| | ||| ||||||||||| |||| |||||||||| || ||| Sbjct 3144 GGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGTATGATTTGGGTATCGGAGCG 3085 Query 683 A 683 | Sbjct 3084 A 3084 Score = 116 bits (128), Expect = 2e-23 Identities = 110/137 (80%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||||||||||||||| || | ||| ||||| | ||| |||||| |||||| | | Sbjct 3736 TGTTTGGGAATGCAGTGTCAAGTTGGCAGGTATTTGTCTGCTAAAGTTAAATACAGAGTA 3677 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 3676 GGAAGACCGATAGCGAACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 3617 Query 165 GTTAAAAAGCACGTGAA 181 || ||| || || |||| Sbjct 3616 GTGAAATAGAACCTGAA 3600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079928507150