Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq296 104 4e-20 seq418 102 1e-19 seq313 102 1e-19 seq295 102 1e-19 seq290 102 1e-19 seq285 102 1e-19 seq284 102 1e-19 seq282 102 1e-19 seq281 102 1e-19 seq280 102 1e-19 seq279 102 1e-19 seq278 102 1e-19 seq277 102 1e-19 seq275 102 1e-19 seq274 102 1e-19 seq271 102 1e-19 seq269 102 1e-19 seq268 102 1e-19 seq263 102 1e-19 seq259 102 1e-19 seq16 102 1e-19 seq287 100 5e-19 >seq296 Length=7677 Score = 104 bits (114), Expect = 4e-20 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 149 GCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGA 208 |||| || | |||||| |||| |||||| ||||| ||||||||||||||| || || | Sbjct 577 GCAGCTTGGGATCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAA 636 Query 209 ACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||| || ||||| ||||||| | |||||||||| Sbjct 637 GCGGCCATGCACCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 686 >seq418 Length=11724 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 581 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 640 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 641 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 679 >seq313 Length=9157 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 8453 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 8394 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 8393 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 8355 >seq295 Length=5558 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 4981 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 4922 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 4921 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 4883 >seq290 Length=7787 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 578 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 637 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 638 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 676 >seq285 Length=9315 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 8764 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 8705 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 8704 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 8666 >seq284 Length=9140 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 571 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 630 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 631 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 669 >seq282 Length=9256 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 8703 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 8644 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 8643 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 8605 >seq281 Length=9404 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 8829 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 8770 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 8769 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 8731 >seq280 Length=9325 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 582 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 641 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 642 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 680 >seq279 Length=9270 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 576 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 635 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 636 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 674 >seq278 Length=9372 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 582 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 641 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 642 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 680 >seq277 Length=8865 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 583 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 642 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 643 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 681 >seq275 Length=9643 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 580 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 639 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 640 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 678 >seq274 Length=9369 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 582 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 641 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 642 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 680 >seq271 Length=9230 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 654 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 713 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 714 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 752 >seq269 Length=9096 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 673 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 732 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 733 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 771 >seq268 Length=5877 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 5177 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 5118 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 5117 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 5079 >seq263 Length=9387 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 8625 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 8566 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 8565 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 8527 >seq259 Length=8659 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 562 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 621 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 622 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 660 >seq16 Length=1411685 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||||| |||| |||||| ||||| ||||||||||||||| || || | |||||||||| Sbjct 353200 TCTCGTCCGTTGACGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGCA 353259 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| || ||||| ||||||| | |||||||||| Sbjct 353260 CCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 353298 >seq287 Length=9248 Score = 100 bits (110), Expect = 5e-19 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 160 TCTCGTTCGTT-ATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||| |||| | |||||| ||||| ||||||||||||||| || || | ||||||||| Sbjct 8633 TCTCGTCCGTTGACCGGAATCAACCAAACAAATCACTCCACCGACCAAAAGCGGCCATGC 8574 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| || ||||| ||||||| | |||||||||| Sbjct 8573 ACCACCATTCAGGGAATCGAGAAAGAACACTCAATCTGTC 8534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796464698