Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq10 98.7 4e-15 seq20 95.1 5e-14 >seq10 Length=920654 Score = 98.7 bits (108), Expect = 4e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| ||| || | ||||| |||||||| || || || || |||| | || Sbjct 12921 GTCATGCGGCTCGGAAAGCCGTGCGGATTCATGATCATATCCGGGCTCATGCCGCGCTCG 12980 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||| || ||| | | |||||| || |||||||| ||||||||| Sbjct 12981 TTGAAGGGCATGTCCACGCCGTTCGCGATGAGGCCGACTACACCCTTCTGCCCGTGGCGG 13040 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGC 449152 | |||||||||| ||| |||| ||| Sbjct 13041 GAGGAGAACTTGTCGCCCGGCTCAGGC 13067 >seq20 Length=1996037 Score = 95.1 bits (104), Expect = 5e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| || || ||| || ||||| || || | ||| ||| ||||| | | Sbjct 65292 GTCATGCGGGAGGGAATGGCGTGGGGGTTGATAATTAAGTCCGGCACGACGCCGTCGCGG 65351 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| || || | | |||||| ||||||||| ||||||||| Sbjct 65352 TTGAAGGGCATGTCCTCCTGGCGGAACTGAATGCCGTTCGTGCCCTTCTGCCCGTGGCGG 65411 Query 449126 CTGCAGAACTTGTCCCC 449142 |||||||||||||| || Sbjct 65412 CTGCAGAACTTGTCGCC 65428 Score = 87.8 bits (96), Expect = 7e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 349097 GGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTC 349156 |||| || || ||||||||||||| || || |||||| ||||||||| | ||||||| Sbjct 1729452 GGCACACCAAGCGTCACGTTCTTGGACGAGATGCCGGCGTTGTGGAAGGTGTTGAGGGTC 1729511 Query 349157 AACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGGC 349216 | ||||||| ||||| ||| ||||| | |||| | ||| | |||||||||||| Sbjct 1729512 ATCTGCGTGGCCGGCTCACCGCACGACTGGGCTGCGATGGCGCCGATGATCTCGCCGGGC 1729571 Query 349217 G 349217 | Sbjct 1729572 G 1729572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084726668111484