Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8796 250 2e-61 seq9113 233 2e-56 seq6209 165 6e-36 >seq8796 Length=7791 Score = 250 bits (276), Expect = 2e-61 Identities = 619/916 (68%), Gaps = 25/916 (3%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 || || ||| ||| || ||||| || | ||| ||||||| || | || | || Sbjct 6859 GAGCCGCTACAGCAGGAAAATCCGTTCCGCTACGTGCTGTTCCCGATTGTCTACCACGAC 6918 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTT 61145 || ||||||| |||||| || ||| |||| | | ||||||| |||||||| |||| | Sbjct 6919 ATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCAT-CTGGACGCTGGAGGAGATCGACCT 6977 Query 61146 GTCCAAAGACATGAATGACTGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAAC 61204 ||| |||||||| ||||||||| | | | ||| ||| || | || ||||| || | Sbjct 6978 CGGCAACGACATGAAGGACTGGGAGAGGCTGAACGA-CGGGGAGCGGCACTTCATCAAGC 7036 Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTT 61264 | ||| ||||||||||||||| ||||| ||||| | |||||| | | | || | Sbjct 7037 ACGTGCTGGCGTTCTTTGCCGGCAGCGACGGCATCGTGATTGAGAACCTGGCGCAGCGCT 7096 Query 61265 TCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGG 61324 || | || ||| | ||| |||||||||| |||||||| |||||| | |||| Sbjct 7097 TCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGG 7156 Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG--AGCGGGC 61382 |||| |||||||||||| |||| || || | || |||||||||| || |||| | Sbjct 7157 AGAACATCCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGCGAGG 7216 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 ||| || || || | | || ||| ||||||| ||| | || ||| ||||| Sbjct 7217 AGAAGCTG--CGGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCGGA 7274 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATT 61502 ||||| | |||||| || | | || | || || || || | | || Sbjct 7275 GTGGGCTGTGCGGTGGATCGGGAG--CGGC-GCGAGCTTCCAGGAGCGGCTGATCGGGTT 7331 Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAA 61562 |||| ||| ||||| | || ||| || ||||| ||| | || ||| ||||||| Sbjct 7332 CGCGGCGGTGGAGGGCATCTTCTTCTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAA 7391 Query 61563 ACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCAT 61622 || || || ||||| || ||||| |||||||| ||| |||| || ||||||||||| | Sbjct 7392 GCGCGGGCTGATGCCTGGGCTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGGCT 7451 Query 61623 GCATTGTGATTTTGCTGTTTTGCTATTCAA-ACGC-TATC-TGGTGAATCGTCCGTCGGA 61679 ||| || || || |||| | ||| ||| ||| | || | ||| || Sbjct 7452 GCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCG-CG-- 7508 Query 61680 GGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT--TCTGAC 61736 ||||| ||| |||| | |||| || ||||| | ||||| | || || |||| Sbjct 7509 CGAGCGCGTGCTGGAGA-TCATCGTGGACGCGGTGAACATCGAGCGCGAGTTCATCTG-- 7565 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTG 61795 ||||| |||| || || ||||||||||| | ||| || ||||||||||| || | Sbjct 7566 CGACGCGCTGCCGGTGCGGCTGATCGGCATGAA-CGCGGAGCTGATGTCGCAGTACATCG 7624 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || ||||| ||||| ||| |||| |||| || || | ||| || || Sbjct 7625 AGTTCGTTGCGGACCGGCTGCTGGTGTCGCTGGGGCTGGAGAAGCACTACAACGTGACGC 7684 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 | || || || |||||||| ||||| |||||| | ||||||||||| || |||||||| Sbjct 7685 AGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGA 7744 Query 61916 GTGTAGGCGACTATCA 61931 || ||||| || || Sbjct 7745 AGGTTGGCGAGTACCA 7760 >seq9113 Length=16536 Score = 233 bits (258), Expect = 2e-56 Identities = 516/768 (67%), Gaps = 8/768 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| | || ||||||||||| || || |||| || || | || ||||| ||| Sbjct 6249 GGCAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTGTACTCCACA 6190 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || |||||||| || || ||| |||||||| | |||| || || ||||| Sbjct 6189 ATCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTG 6130 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || |||||||| | ||| |||| ||||||||| | || ||||| | || Sbjct 6129 TTGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 6070 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 || ||| | | |||||| | ||| | || | | || | ||||| | Sbjct 6069 GCAAACCACACCTCCTGTGCCTGGATCGTCTGCACTCCGCGGCCCTCCGCCTCGTAGCGC 6010 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 || || ||| | ||||| || || | ||| || | || ||| || ||| Sbjct 6009 TCATACAGGCGCTCGAACTCCTCGCCGTAGCAGTCGCTGAGGCCCGGGCACGTGCTTGGG 5950 Query 66302 CACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 |||||||| ||| | || || || ||| || || ||| || || || || ||||| Sbjct 5949 TCCATCAGCGTCCACTTCCCCTCACTCTTC-ACGCGCTTCATGAACAGGTCGGGGATCCA 5891 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA--AG 66418 || ||||||||||| ||||| || || || || || ||||| | |||||| || Sbjct 5890 CAGCGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGG---TGTTGCGCTTCAG 5834 Query 66419 TCG-AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 | ||||| | ||||||||||| ||||| || || ||||| |||||||| | |||| | Sbjct 5833 CAGCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTT 5774 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 || || ||||| || ||||| |||||||| || |||||||| || |||| |||||| Sbjct 5773 GCGCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGG 5714 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 || || ||||| || |||| || ||||| ||||| | || | || || | Sbjct 5713 CACCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTT 5654 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 ||| || | ||| || || || ||||||| ||| |||| | || || || || || Sbjct 5653 GTGCACGTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGT 5594 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || ||||||||| ||| |||| | | |||| |||| || || | || Sbjct 5593 GTCGTAAATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGCACGAGCTCATCTG 5534 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 || || |||||| |||| ||||||||| || || |||||||| || Sbjct 5533 CGGCTTTGGTGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAA 5486 >seq6209 Length=3470 Score = 165 bits (182), Expect = 6e-36 Identities = 448/668 (67%), Gaps = 21/668 (3%) Strand=Plus/Plus Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || ||| | ||| |||||||||| |||||||| |||||| | |||||||| || Sbjct 3 GACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGGAGAACATC 62 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA--GCGGGCGGAACGTG 61390 |||||||||| |||| || || | || |||||||||| ||| ||| | ||| || Sbjct 63 CACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGCGAGGAGAAGCTG 122 Query 61391 AACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450 || || | | || ||| ||||||| ||| | || ||| ||||| ||||| Sbjct 123 --CGGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCTG 180 Query 61451 TCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 | |||||| || | || | | || || || || | | || |||| || Sbjct 181 TGCGGTGGATCGGGAG--CGGCG-CGAGCTTCCAGGAGCGGCTGATCGGGTTCGCGGCGG 237 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 | ||||| | || ||| || ||||| ||| | || ||| ||||||| || || | Sbjct 238 TGGAGGGCATCTTCTTCTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGGC 297 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||| || ||||| |||||||| ||| |||| || ||||||||||| |||| | Sbjct 298 TGATGCCTGGGCTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGGCTGCACACGG 357 Query 61631 ATTTTGCTGTTTTGCTATTCAAA-CGCT-ATCTGGTG-AATCGTCCGTCGGAGGAGCGTG 61687 | || || |||| | ||| ||| ||| | || | ||| || ||||| | Sbjct 358 ACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCG-CGC--GAGCGCG 414 Query 61688 TGGGTGAGATTGTTCGTG-AGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTT 61744 || ||||| | |||| | ||||| | ||||| | || || |||| ||||| Sbjct 415 TGCTGGAGATCAT-CGTGGACGCGGTGAACATCGAGCGCGAGTTCATCTGC--GACGCGC 471 Query 61745 TGCCCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGTT 61803 |||| || || ||||||||||| | ||| || ||||||||||| || || || ||| Sbjct 472 TGCCGGTGCGGCTGATCGGCATGAAC-GCGGAGCTGATGTCGCAGTACATCGAGTTCGTT 530 Query 61804 GCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTT 61863 || ||||| ||| |||| |||| || || | ||| || || | || || Sbjct 531 GCGGACCGGCTGCTGGTGTCGCTGGGGCTGGAGAAGCACTACAACGTGACGCAGCCCTTC 590 Query 61864 GATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGC 61923 || |||||||| ||||| |||||| | ||||||||||| || |||||||| || ||| Sbjct 591 GACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGAAGGTTGGC 650 Query 61924 GACTATCA 61931 || || || Sbjct 651 GAGTACCA 658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397495159703120