Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value SEQ13492 86.0 2e-11 >SEQ13492 Length=4547 Score = 86.0 bits (94), Expect = 2e-11 Identities = 210/313 (67%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 12734 ACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCA 12793 |||||||| |||| || ||||| || ||| ||| || || || ||| || || || Sbjct 3231 ACATCGTAGAAGATGACATTCATACCCAGAGCCTCGGCGAGAACGCCGACTTGCGAGCCG 3172 Query 12794 ATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCT-TGAGA 12852 |||| ||| || || || ||||| || || || || | || || ||| || || | Sbjct 3171 ATGTGACCGTAGCCAACGATACCGAGTGTTTTGCCGCGCACCTCGTAGCAGCCAATGTGC 3112 Query 12853 AGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAG 12912 ||||||||||||| || | || | |||| | | | | | || ||| || || Sbjct 3111 -GTCTTGTTCCAAACACCCCGATGGACCTCTTCGCTGCGTTGAGTCATCTTACGCGACAG 3053 Query 12913 ATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATT 12972 ||| | || || |||| ||||| || ||||| | |||||| |||||| || || Sbjct 3052 CGAAATGATTTCGCCAATGACAAGCTCCGCAACGCTGCGCGTGTTGGCAAAGGGGGAGTT 2993 Query 12973 AAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGAT-CGTAACCAATGC 13031 || || || | || | ||| | || ||| || | |||||| | |||| ||||||| Sbjct 2992 GAACACCGCCACACCACGCTTGTTGGCGTGGTCCAGGTCAACCTGGTTCGTA-CCAATGC 2934 Query 13032 AGAAGCATCCTAT 13044 ||||||| || || Sbjct 2933 AGAAGCAACCGAT 2921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884523351441469