Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6969 230 2e-55 seq6968 230 2e-55 seq6967 230 2e-55 seq5564 93.3 3e-14 >seq6969 Length=25347 Score = 230 bits (254), Expect = 2e-55 Identities = 515/768 (67%), Gaps = 8/768 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| | || ||||||||||| || || |||| || || | || ||||| ||| Sbjct 10983 GGCAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTGTACTCCACA 10924 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || |||||||| || || ||| |||||||| | |||| || || ||||| Sbjct 10923 ATCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTG 10864 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || |||||||| | ||| |||| ||||||||| | || ||||| | || Sbjct 10863 TTGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 10804 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 || ||| | | |||||| | ||| | || | | || | ||||| | Sbjct 10803 GCAAACCACACCTCCTGTGCCTGGATCGTCTGCACTCCGCGGCCCTCCGCCTCGTAGCGC 10744 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 ||||| ||| | ||||| || || | || |||| || ||| | ||| Sbjct 10743 TCGTACAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTGGG 10684 Query 66302 CACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 |||||||| ||| | || || || ||| || || ||| || || || || ||||| Sbjct 10683 TCCATCAGCGTCCACTTCCCCTCACTCTTC-ACGCGCTTCATGAACAGGTCGGGGATCCA 10625 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA--AG 66418 || ||||||||||| ||||| || || || || || ||||| | |||||| || Sbjct 10624 CAGCGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGG---TGTTGCGCTTCAG 10568 Query 66419 TCG-AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 | ||||| | ||||||||||| ||||| || || ||||| |||||||| | |||| | Sbjct 10567 CAGCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTT 10508 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 || || ||||| || ||||| |||||||| || |||||||| || |||| |||||| Sbjct 10507 GCGCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGG 10448 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 || || ||||| || |||| || ||||| ||||| | || | || || | Sbjct 10447 CACCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTT 10388 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 ||| || | ||| || || || ||||||| ||| |||| | || || || || || Sbjct 10387 GTGCACGTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGT 10328 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || ||||||||| ||| |||| | | |||| |||| || || | || Sbjct 10327 GTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGCACGAGCTCATCTG 10268 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 || || || ||| |||| ||||||||| || || |||||||| || Sbjct 10267 CGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAA 10220 >seq6968 Length=12362 Score = 230 bits (254), Expect = 2e-55 Identities = 515/768 (67%), Gaps = 8/768 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| | || ||||||||||| || || |||| || || | || ||||| ||| Sbjct 10983 GGCAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTGTACTCCACA 10924 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || |||||||| || || ||| |||||||| | |||| || || ||||| Sbjct 10923 ATCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTG 10864 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || |||||||| | ||| |||| ||||||||| | || ||||| | || Sbjct 10863 TTGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 10804 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 || ||| | | |||||| | ||| | || | | || | ||||| | Sbjct 10803 GCAAACCACACCTCCTGTGCCTGGATCGTCTGCACTCCGCGGCCCTCCGCCTCGTAGCGC 10744 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 ||||| ||| | ||||| || || | || |||| || ||| | ||| Sbjct 10743 TCGTACAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTGGG 10684 Query 66302 CACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 |||||||| ||| | || || || ||| || || ||| || || || || ||||| Sbjct 10683 TCCATCAGCGTCCACTTCCCCTCACTCTTC-ACGCGCTTCATGAACAGGTCGGGGATCCA 10625 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA--AG 66418 || ||||||||||| ||||| || || || || || ||||| | |||||| || Sbjct 10624 CAGCGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGG---TGTTGCGCTTCAG 10568 Query 66419 TCG-AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 | ||||| | ||||||||||| ||||| || || ||||| |||||||| | |||| | Sbjct 10567 CAGCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTT 10508 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 || || ||||| || ||||| |||||||| || |||||||| || |||| |||||| Sbjct 10507 GCGCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGG 10448 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 || || ||||| || |||| || ||||| ||||| | || | || || | Sbjct 10447 CACCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTT 10388 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 ||| || | ||| || || || ||||||| ||| |||| | || || || || || Sbjct 10387 GTGCACGTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGT 10328 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || ||||||||| ||| |||| | | |||| |||| || || | || Sbjct 10327 GTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGCACGAGCTCATCTG 10268 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 || || || ||| |||| ||||||||| || || |||||||| || Sbjct 10267 CGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAA 10220 >seq6967 Length=22635 Score = 230 bits (254), Expect = 2e-55 Identities = 515/768 (67%), Gaps = 8/768 (1%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| | || ||||||||||| || || |||| || || | || ||||| ||| Sbjct 1216 GGCAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTGTACTCCACA 1275 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || |||||||| || || ||| |||||||| | |||| || || ||||| Sbjct 1276 ATCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTG 1335 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || |||||||| | ||| |||| ||||||||| | || ||||| | || Sbjct 1336 TTGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 1395 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 || ||| | | |||||| | ||| | || | | || | ||||| | Sbjct 1396 GCAAACCACACCTCCTGTGCCTGGATCGTCTGCACTCCGCGGCCCTCCGCCTCGTAGCGC 1455 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 ||||| ||| | ||||| || || | || |||| || ||| | ||| Sbjct 1456 TCGTACAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTGGG 1515 Query 66302 CACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 |||||||| ||| | || || || ||| || || ||| || || || || ||||| Sbjct 1516 TCCATCAGCGTCCACTTCCCCTCACTCTTC-ACGCGCTTCATGAACAGGTCGGGGATCCA 1574 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA--AG 66418 || ||||||||||| ||||| || || || || || ||||| | |||||| || Sbjct 1575 CAGCGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGG---TGTTGCGCTTCAG 1631 Query 66419 TCG-AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 | ||||| | ||||||||||| ||||| || || ||||| |||||||| | |||| | Sbjct 1632 CAGCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTT 1691 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 || || ||||| || ||||| |||||||| || |||||||| || |||| |||||| Sbjct 1692 GCGCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGG 1751 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 || || ||||| || |||| || ||||| ||||| | || | || || | Sbjct 1752 CACCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTT 1811 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 ||| || | ||| || || || ||||||| ||| |||| | || || || || || Sbjct 1812 GTGCACGTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGT 1871 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || ||||||||| ||| |||| | | |||| |||| || || | || Sbjct 1872 GTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGCACGAGCTCATCTG 1931 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 || || || ||| |||| ||||||||| || || |||||||| || Sbjct 1932 CGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAA 1979 >seq5564 Length=1640 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGA 61796 ||||| |||| || || ||||||||||| | ||| || ||||||||||| || || Sbjct 7 GACGCGCTGCCGGTGCGGCTGATCGGCATGAAC-GCGGAGCTGATGTCGCAGTACATCGA 65 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || ||||| ||||| ||| |||| |||| || || | ||| || || | Sbjct 66 GTTCGTTGCGGACCGGCTGCTGGTGTCGCTGGGGCTGGAGAAGCACTACAACGTGACGCA 125 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 || || || |||||||| ||||| |||||| | ||||||||||| || |||||||| Sbjct 126 GCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGAA 185 Query 61917 TGTAGGCGACTATCA 61931 || ||||| || || Sbjct 186 GGTTGGCGAGTACCA 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397519260523760