Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq7593 100 1e-15 seq6102 100 1e-15 seq8929 84.2 9e-11 seq8928 84.2 9e-11 seq8927 84.2 9e-11 >seq7593 Length=7721 Score = 100 bits (110), Expect = 1e-15 Identities = 183/265 (69%), Gaps = 5/265 (2%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||| || || || ||| |||||||| ||||||| ||||||| | ||||| | Sbjct 3247 GTCATACGGGAAGGAATGGCGTGCGGGTTGATGATGAGGTCGGGCACCACGCCGTCACGA 3306 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| | || | | ||||| ||||||||| ||||| ||| Sbjct 3307 TTGAAGGGCATGTCCTCCTGACGGAACTGAATACCGTTCGTGCCCTTCTGCCCGTGCCGG 3366 Query 449126 CTGCAGAACTTGTC-CCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGATGGA 449184 |||||||||||||| || || ||||| || | || ||| | | | |||| || | Sbjct 3367 CTGCAGAACTTGTCACCGATGTTCGGGATTTTG-ATGGTGCGGATCTTCACCTTGGTGAA 3425 Query 449185 GCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGACTCCACGACGGCGTCGTCGGTGCC 449244 ||| ||||| |||| | || || ||| |||||| ||| | | |||||| Sbjct 3426 ACGGTCGCCGT---TGTTCATCGTCAGCATCACCTTCTCCACCACGCCCTTCTCGGTGGT 3482 Query 449245 GCGGTAGATGGTGCTGCTGTCGTGC 449269 |||| || | ||||| |||| || Sbjct 3483 GCGGGAGGTAATGCTGGCGTCGCGC 3507 >seq6102 Length=7716 Score = 100 bits (110), Expect = 1e-15 Identities = 183/265 (69%), Gaps = 5/265 (2%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||| || || || ||| |||||||| ||||||| ||||||| | ||||| | Sbjct 4470 GTCATACGGGAAGGAATGGCGTGCGGGTTGATGATGAGGTCGGGCACCACGCCGTCACGA 4411 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| | || | | ||||| ||||||||| ||||| ||| Sbjct 4410 TTGAAGGGCATGTCCTCCTGACGGAACTGAATACCGTTCGTGCCCTTCTGCCCGTGCCGG 4351 Query 449126 CTGCAGAACTTGTC-CCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGATGGA 449184 |||||||||||||| || || ||||| || | || ||| | | | |||| || | Sbjct 4350 CTGCAGAACTTGTCACCGATGTTCGGGATTTTG-ATGGTGCGGATCTTCACCTTGGTGAA 4292 Query 449185 GCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGACTCCACGACGGCGTCGTCGGTGCC 449244 ||| ||||| |||| | || || ||| |||||| ||| | | |||||| Sbjct 4291 ACGGTCGCCGT---TGTTCATCGTCAGCATCACCTTCTCCACCACGCCCTTCTCGGTGGT 4235 Query 449245 GCGGTAGATGGTGCTGCTGTCGTGC 449269 |||| || | ||||| |||| || Sbjct 4234 GCGGGAGGTAATGCTGGCGTCGCGC 4210 >seq8929 Length=9316 Score = 84.2 bits (92), Expect = 9e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||| || |||| || | ||||| ||||| || ||||| || || |||| | || Sbjct 1335 GTCATACGACTCGGGAAGCCGTGCGGATTCATAATCATGTCCGGGCTCATGCCGCGCTCG 1394 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||| || ||| | | || ||| ||||||||||| |||||||| Sbjct 1395 TTGAAGGGCATGTCCACGCCGTTTGCGATGAGCCCGACAACGCCCTTCTGACCGTGGCGA 1454 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGG 449151 | |||||||| ||| |||| || Sbjct 1455 GACGAAAACTTGTCGCCCGGCTCTGG 1480 >seq8928 Length=9347 Score = 84.2 bits (92), Expect = 9e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||| || |||| || | ||||| ||||| || ||||| || || |||| | || Sbjct 1335 GTCATACGACTCGGGAAGCCGTGCGGATTCATAATCATGTCCGGGCTCATGCCGCGCTCG 1394 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||| || ||| | | || ||| ||||||||||| |||||||| Sbjct 1395 TTGAAGGGCATGTCCACGCCGTTTGCGATGAGCCCGACAACGCCCTTCTGACCGTGGCGA 1454 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGG 449151 | |||||||| ||| |||| || Sbjct 1455 GACGAAAACTTGTCGCCCGGCTCTGG 1480 >seq8927 Length=8522 Score = 84.2 bits (92), Expect = 9e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||| || |||| || | ||||| ||||| || ||||| || || |||| | || Sbjct 7083 GTCATACGACTCGGGAAGCCGTGCGGATTCATAATCATGTCCGGGCTCATGCCGCGCTCG 7024 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||| || ||| | | || ||| ||||||||||| |||||||| Sbjct 7023 TTGAAGGGCATGTCCACGCCGTTTGCGATGAGCCCGACAACGCCCTTCTGACCGTGGCGA 6964 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGG 449151 | |||||||| ||| |||| || Sbjct 6963 GACGAAAACTTGTCGCCCGGCTCTGG 6938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084463963610082