Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2219 91.5 6e-13 >seq2219 Length=60835 Score = 91.5 bits (100), Expect = 6e-13 Identities = 211/313 (67%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 12734 ACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCA 12793 |||||||| |||| || ||||| || ||| ||| || || || ||| || || || Sbjct 57583 ACATCGTAGAAGATGACATTCATACCCAGAGCCTCGGCGAGAACGCCGACTTGCGAGCCG 57642 Query 12794 ATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCT-TGAGA 12852 |||| ||| || || || ||||| || || || || | || || ||| || || | Sbjct 57643 ATGTGACCGTAGCCCACGATACCGAGTGTTTTGCCGCGCACCTCGTAGCAGCCAATGTGC 57702 Query 12853 AGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAG 12912 ||||||||||||| || | || | |||| | | | | | || ||| || || Sbjct 57703 -GTCTTGTTCCAAACACCCCGATGGACCTCTTCGCTGCGTTGAGTCATCTTACGCGACAG 57761 Query 12913 ATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATT 12972 ||| | || || |||| ||||| || ||||| | |||||| |||||| ||||| Sbjct 57762 CGAAATGATTTCGCCAATGACAAGCTCCGCAACGCTGCGCGTGTTGGCAAAGGGGGAATT 57821 Query 12973 AAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGAT-CGTAACCAATGC 13031 || || || | || | ||| | || ||| || | |||||| | |||| ||||||| Sbjct 57822 GAACACCGCCACACCGCGCTTGTTGGCGTGGTCCAGGTCAACCTGGTTCGTA-CCAATGC 57880 Query 13032 AGAAGCATCCTAT 13044 ||||||| || || Sbjct 57881 AGAAGCAACCGAT 57893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884643474073687