Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq21422 98.7 1e-18 seq37336 95.1 2e-17 seq24242 93.3 6e-17 seq15862 89.7 8e-16 seq38953 80.6 4e-13 seq28771 80.6 4e-13 seq23220 80.6 4e-13 seq12175 80.6 4e-13 seq378 80.6 4e-13 seq11442 77.0 5e-12 seq28064 75.2 2e-11 seq27805 75.2 2e-11 seq4850 75.2 2e-11 seq36886 73.4 6e-11 seq26955 73.4 6e-11 seq21276 73.4 6e-11 seq19920 73.4 6e-11 seq10915 73.4 6e-11 >seq21422 Length=2468 Score = 98.7 bits (108), Expect = 1e-18 Identities = 168/238 (71%), Gaps = 17/238 (7%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||| | |||| |||||| |||| | | ||| Sbjct 407 GTACAAATGGCAGGGACGTAATCAGTGTAAGCTC-ATGACTTGCGC-------GCAGTTC 458 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA--GAT 118 ||| || ||| || ||| ||||| ||| |||| ||||||| | || |||||| | | Sbjct 459 CTCATTCAAGGAGAATAATCGCAATCATCGATCCTTATCACGACGCAAGTTCAAAAGGGT 518 Query 119 TACCCGGACCTG-TCGG---CC--AAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCG 171 | || | | | || || |||| | || || ||| ||| | ||||||||| | Sbjct 519 TCCCATCATAAGGTAGGTAGCCGGAAGGCTCTCGAACTAGTTTAATGCGTCAGTGTAGAG 578 Query 172 CGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG 229 ||||||| ||||| ||||| | | |||||||||||||||||| | ||| |||||| Sbjct 579 CGCGTGCACCCCAGGACATCAAGGAGCATCACAGACCTGTTATCGGCTCGCTCTTCCG 636 >seq37336 Length=11388 Score = 95.1 bits (104), Expect = 2e-17 Identities = 96/120 (80%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| |||||||||||||| || ||| |||||||| |||| ||||||| |||| Sbjct 917 GTACAAAGG-CAGGGACGTAGTCAGTGCAAGC-TGATGACTTGCGCCTACTAGGCATTT- 861 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATG-AAATTTCAAAGATT 119 || || ||| || ||| ||||| ||| |||| |||||||| | ||||| ||||||| Sbjct 860 CTTATTCAAGGAGAATAATGGCAATCATCGATCCTCATCACGACGCAAATTCAAAAGATT 801 >seq24242 Length=1394 Score = 93.3 bits (102), Expect = 6e-17 Identities = 165/235 (70%), Gaps = 17/235 (7%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGT-CAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59 ||||||| ||||||||||| | || || ||| || ||||| |||||| ||||| | || Sbjct 817 GTACAAACGGCAGGGACGTGTTACAGTGCAAGC-TGTTGACTTGCGCTTGCTAGGCA-TT 874 Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTC-AAAGAT 118 |||| | ||| || ||||||||| ||| |||| |||||||| | || || |||||| Sbjct 875 CCTCATGCAAGGAGAATAATTGCAATCATCGATCCTCATCACGACGCAAGCTCAAAAGAT 934 Query 119 TACCC-GGACCT----GTCGGCCAAGGT--------GATAGACTCGTTGAATACATCAGT 165 | ||| | || | || || | || | |||||| || | || Sbjct 935 TTCCCATTATCTTCAAGATAGCTTAGATAAGTAGCCGAAAAGCTCGTTCGATGCGTCGTA 994 Query 166 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||| |||||||||||| || ||| || | |||||||||||||| ||||| ||| Sbjct 995 GTAGTGCGCGTGCGGCCTAGGACAATTAGGAGCATCACAGACCTGCTATTGGCTC 1049 >seq15862 Length=3205 Score = 89.7 bits (98), Expect = 8e-16 Identities = 97/124 (78%), Gaps = 6/124 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||| || |||| |||| || |||| || || ||| | Sbjct 35 GTACAAATGGCAGGGACGTAATCAGTGCAAGCT-GATGGCTTGCGC---CTGGGCATT-C 89 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTC-AAAGATT 119 ||| || ||| |||||||||||| ||| |||| |||||| ||| || ||| ||||||| Sbjct 90 CTCATTCAAGGAGAACAATTGCAATCATCGATCCTCATCACAATGCAAGTTCAAAAGATT 149 Query 120 ACCC 123 ||| Sbjct 150 TCCC 153 >seq38953 Length=1132 Score = 80.6 bits (88), Expect = 4e-13 Identities = 128/180 (71%), Gaps = 13/180 (7%) Strand=Plus/Plus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATTACCCGGAC----C 128 || ||||||||| ||| |||| | |||||||| || |||||| | || ||| | | Sbjct 575 AATAATTGCAATCATCGATCCTCGTCACGATGCAAGTTCAAAAGCTTTCCCATCCTCTTC 634 Query 129 T-----GTCGGCC--AAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 | | | ||| |||| | | ||||||| ||| | ||||||||| |||||| | | Sbjct 635 TAGAAAGGCAGCCGGAAGGCTCTCAAACTCGTTTAATGCGTCAGTGTAGTGCGCGTTCAG 694 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 || || |||| || |||||||||||||| ||||| ||| |||||| | ||| ||| Sbjct 695 CCTAGGACATTTAGAAGCATCACAGACCTGCTATTGGCTCGCTCTTCCGCGCGCTATAAG 754 >seq28771 Length=1792 Score = 80.6 bits (88), Expect = 4e-13 Identities = 153/218 (70%), Gaps = 23/218 (11%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||| || ||| |||||||| |||| |||| |||||| Sbjct 758 GTACAAATGGCAGGGACGTAATCAGTGCAAGC-TGATGACTTGCGCCTACTGAGAATTT- 701 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA--TTTCAAAGAT 118 ||| || ||| || |||||||| ||| ||| |||||| | || || |||||| Sbjct 700 CTCATTCAAGGAGAAGAATTGCAACCATCGATC----TCACGACGCAACGTTCAAAAGAT 645 Query 119 TACCCGGAC-CTGTCG--GCC--AAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGC 172 | ||| | || || ||| |||| | | ||||||| |||| | || Sbjct 644 TTCCCATCCTCTTCCGTAGCCGGAAGGCTCTCAAACTCGTTTAATA---------GGTGC 594 Query 173 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG 210 |||||| ||| || |||| || | ||| |||||||||| Sbjct 593 GCGTGCAGCCTAGGACATTTAGGAGCAACACAGACCTG 556 >seq23220 Length=1117 Score = 80.6 bits (88), Expect = 4e-13 Identities = 123/168 (73%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 58 TTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-G 116 |||||| | ||| || |||||||| ||| ||| | ||||||| | || |||| | Sbjct 262 TTCCTCAGTCAAGGAGAATAATTGCAACCATCGATCTC-ATCACGACGCAAGCACAAACG 320 Query 117 ATTACCCGGAC-CTGTCGGCC--AAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGC 172 ||| ||| | ||| | ||| |||| | | |||||||||| | ||||||||| || Sbjct 321 ATTTCCCATCCTCTG-CAGCCGAAAGGCTCTCAAACTCGTTGAACGCGTCAGTGTAGTGC 379 Query 173 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 ||||| ||| || |||| || | |||||||||||||| ||||| ||| Sbjct 380 GCGTGTAGCCTAGGACATTTAGGAGCATCACAGACCTGCTATTGGCTC 427 >seq12175 Length=3494 Score = 80.6 bits (88), Expect = 4e-13 Identities = 81/103 (79%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| ||||||||||| ||| || ||| ||||| || |||| ||||||| | ||| Sbjct 194 GTACAAATGGCAGGGACGTCATCAGTGCAAGC-TGATGGCTTGCGCCTACTAGGCA-TTC 137 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 ||| || ||| || | ||||||| ||| |||| |||||||| Sbjct 136 CTCATTCAAGGAGAATACTTGCAATCATCGATCCTCATCACGA 94 >seq378 Length=3108 Score = 80.6 bits (88), Expect = 4e-13 Identities = 91/118 (77%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 || || |||||||||||| ||| || ||| ||| |||||| || ||||||| | ||||| Sbjct 641 ACGAATGGCAGGGACGTAATCAGTGCAAGC-TGACGACTCGAGCCTACTAGGCA-TTCCT 698 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTC-AAAGATT 119 | || ||| || ||||||||| || |||| |||| ||| | || ||| ||||||| Sbjct 699 CATTCAAGGAGAATAATTGCAATCGTCGATCCTCATCGCGACGCAAGTTCAAAAGATT 756 >seq11442 Length=1948 Score = 77.0 bits (84), Expect = 5e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 148 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207 |||||| ||| | ||||||||| |||||||| ||| || |||| || | ||||||||||| Sbjct 1148 CTCGTTTAATGCGTCAGTGTAGTGCGCGTGCAGCCTAGGACATTTAGGAGCATCACAGAC 1207 Query 208 CTGTTATTGCCT 219 ||| ||||| || Sbjct 1208 CTGCTATTGGCT 1219 >seq28064 Length=2334 Score = 75.2 bits (82), Expect = 2e-11 Identities = 80/103 (78%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||| || |||||||||||| ||| || ||| ||||||| |||| ||||||| | ||| Sbjct 670 GTACTAACGGCAGGGACGTATTCAGTGCAAGC-AGATGACTTGCGCCTACTAGGCA-TTC 613 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 ||| || ||| | ||||||||| ||| |||| |||| ||| Sbjct 612 CTCATTCAAGGAGAGTAATTGCAATCATCGATCCTCATCGCGA 570 >seq27805 Length=2450 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 149 TCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 208 ||||| ||| | ||||||||| |||||||| ||| || |||| | | ||||||||||| Sbjct 1059 TCGTTCAATGCGTCAGTGTAGTGCGCGTGCAGCCTAGGACATTCAGGAGCATCACAGACT 1000 Query 209 TGTTATTGCCTCAAACTTCCG 229 |||||||| ||| |||||| Sbjct 999 TGTTATTGGCTCGCTCTTCCG 979 >seq4850 Length=1538 Score = 75.2 bits (82), Expect = 2e-11 Identities = 64/78 (82%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 38 GACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCA 97 |||| |||| ||||||| ||| ||||||| ||| |||||||||||| ||| |||| || Sbjct 1146 GACTTGCGCCTACTAGGCATT-CCTCGTTCAAGGAGAACAATTGCAATCATCAATCCTCA 1088 Query 98 TCACGATGAAATTTCAAA 115 |||||| | || |||||| Sbjct 1087 TCACGACGCAAGTTCAAA 1070 >seq36886 Length=2312 Score = 73.4 bits (80), Expect = 6e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||||||| ||| | ||||||||| |||| ||| ||| || |||| || | |||||||||| Sbjct 2240 ACTCGTTTAATGCGTCAGTGTAGTGCGCATGCAGCCTAGGACATTTAGGAGCATCACAGA 2299 Query 207 CCTGTTATTGCCT 219 |||| ||||| || Sbjct 2300 CCTGCTATTGGCT 2312 >seq26955 Length=1262 Score = 73.4 bits (80), Expect = 6e-11 Identities = 94/125 (75%), Gaps = 11/125 (9%) Strand=Plus/Plus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTA--GGAATTT 59 |||||| | |||||||||| ||| || |||| ||||||| |||| | ||| || ||| Sbjct 532 TACAAATGTCAGGGACGTAATCAGTGCAAGCT-GATGACTTGCGCCTTCTACAGGCATT- 589 Query 60 CCTCGTTGAAGACCAACAATTGCAAT-----GATCTATCCCCATCACGATGAAATTTCAA 114 |||| || ||| ||||||||| || ||||| || ||||| || | |||||||| Sbjct 590 CCTCATTCAAGGAAAACAATTGCCATACATTGATCT--CCTCATCATGACGCAATTTCAA 647 Query 115 AGATT 119 ||||| Sbjct 648 AGATT 652 >seq21276 Length=10406 Score = 73.4 bits (80), Expect = 6e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||||||| ||| | ||||||||| |||||||| ||| | |||| || | |||||||||| Sbjct 11 ACTCGTTTAATGCGTCAGTGTAGTGCGCGTGCAGCCTACGACATTTAGGAGCATCACAGA 70 Query 207 CCTGTTATTGCCT 219 |||| ||||| || Sbjct 71 CCTGCTATTGGCT 83 >seq19920 Length=2268 Score = 73.4 bits (80), Expect = 6e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 148 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207 |||||| ||| | ||||||||| |||||||| ||| | |||| || | ||||||||||| Sbjct 957 CTCGTTTAATGCGTCAGTGTAGTGCGCGTGCAGCCTGGGACATTTAGGAGCATCACAGAC 898 Query 208 CTGTTATTGCCTC 220 ||| ||||| ||| Sbjct 897 CTGCTATTGGCTC 885 >seq10915 Length=2302 Score = 73.4 bits (80), Expect = 6e-11 Identities = 104/141 (74%), Gaps = 9/141 (6%) Strand=Plus/Plus Query 77 AATTGCAATGATCTATCCCCA----TCACGATGAAATTTCAAA-GATTACCCGGACCTGT 131 ||||||||| ||| |||| || |||||| | || |||||| |||| ||| | | Sbjct 1229 AATTGCAATCATCGATCCTCACTCATCACGACGCAAGTTCAAAAGATTTCCCACCCTGGG 1288 Query 132 CGGCC--AAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAAC 188 ||| |||| | | ||||||| ||| | ||| ||||| |||||||| ||| || || Sbjct 1289 TAGCCGGAAGGCTCCCAAACTCGTTTAATGCGTCA-TGTAGTGCGCGTGCAGCCTAGGAC 1347 Query 189 ATCTAAGGGCATCACAGACCT 209 || || ||||||||||||||| Sbjct 1348 ATTTAGGGGCATCACAGACCT 1368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751712876295