Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq26224 77.0 6e-12 seq14966 77.0 6e-12 seq16029 73.4 7e-11 seq4377 73.4 7e-11 >seq26224 Length=1150 Score = 77.0 bits (84), Expect = 6e-12 Identities = 92/124 (74%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 ||| |||| ||| | || || ||| ||| || |||||||||||||||||||||| Sbjct 431 GATCAATAAGGACTGCCGCGGTTGTACGTACTCCTACGTCAGAGGTGAAATTCTTGGATC 372 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||| |||| ||||||| || ||| | || |||| | ||||||||| ||||| Sbjct 371 GTAGGAAGACGAACTTCTGCGAAGGCATTCGACGAGTATGTCTCCATTAATCA-AGAACG 313 Query 308 AAAG 311 | || Sbjct 312 AGAG 309 >seq14966 Length=4032 Score = 77.0 bits (84), Expect = 6e-12 Identities = 62/75 (83%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 226 TCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGA 285 ||||||||||||||||| || |||||| |||| |||||||||| ||| |||| | Sbjct 1362 TCAGAGGTGAAATTCTTAAATCGTAGGAAGACGAACTTCTGCGAAAGCATTCGGCAAGAA 1303 Query 286 TGTTTTCATTAATCA 300 ||||||||||||||| Sbjct 1302 TGTTTTCATTAATCA 1288 >seq16029 Length=1162 Score = 73.4 bits (80), Expect = 7e-11 Identities = 84/113 (74%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 ||| |||| ||| | ||||| || ||| || ||| |||||||||| ||| ||| Sbjct 774 GATCAATAAGGACCGCCGGGGTCGTACGTACTCTTACGTCGGAGGTGAAATGCTTAGATC 833 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 |||||| |||| |||||||||| ||| |||| |||| ||||||||||| Sbjct 834 GTAGGAAGACGAACTTCTGCGAAAGCTTTCGACAAGAATGTCTTCATTAATCA 886 >seq4377 Length=2700 Score = 73.4 bits (80), Expect = 7e-11 Identities = 89/120 (74%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| | | ||| || ||| || || ||||||||||||||| ||| Sbjct 77 AATAGGGACTGCCAGGGTCGTACGTACTCCTACGTTAGAGGTGAAATTCTTAGATAGTGG 136 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||| |||| |||| ||||| ||| |||| |||| ||||||||||| |||||| || Sbjct 137 GAAGACGAACTTCTGCTAAAGCATTCGACAAGAATGTCTTCATTAATCA-AGAACGAGAG 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914839292224