Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq9892 279 1e-72 >seq9892 Length=17670 Score = 279 bits (308), Expect = 1e-72 Identities = 263/334 (79%), Gaps = 1/334 (0%) Strand=Plus/Minus Query 9 AAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGT 68 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 9751 AAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGT 9692 Query 69 TAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATC 128 || |||| |||||||| ||||| ||||| |||||| | |||| ||| |||||| | Sbjct 9691 TATCCGGATTTACTGGGTTTAAAGGGTGCGTAGGCGGCATTTTAAGTCAGTGGTGAAAGC 9632 Query 129 CCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGG 188 | | ||||||| ||| ||| ||| |||| || |||| ||||| | Sbjct 9631 CTGGCGCTTAACGCCAGAAATGCCATTGATACTGATGTGCTTGAGTCAAGAAGAGGTAAG 9572 Query 189 TGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGG 248 |||||| ||||||| ||||||||| |||||| |||||| ||||| ||||||| Sbjct 9571 CAGAATTCATGGTGTAGCGGTGAAATGCATAGATACCATGAGGAATTCCAATAGCGAAGG 9512 Query 249 CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 | || |||| | ||||||||| | ||||||||||||||||||| ||||||||||| Sbjct 9511 CCGCTTACTGGTCTTGTACTGACGCTGAGGCACGAAAGCGTGGGGAGCGAACAGGATTAG 9452 Query 309 ATACCCTGGTAGTCCACGCCCTAAACGAT-ATCA 341 |||||||||||||||||||| |||||||| |||| Sbjct 9451 ATACCCTGGTAGTCCACGCCGTAAACGATGATCA 9418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289091729952