Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq9892 376 7e-102 >seq9892 Length=17670 Score = 376 bits (416), Expect = 7e-102 Identities = 392/504 (78%), Gaps = 18/504 (4%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 9359 TACGCGCGCAAGCGTGAAACTCAAAGGAATTGACGGGGGTCCGCACAAGCGGTGGAGCAT 9300 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | |||||| |||||||||| || || || ||| | || Sbjct 9299 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCTGGGCTCGAATGCCCCTGCTACTTC 9240 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 ||| || || | || ||||| ||||||| | | ||||| ||||||| |||||||| Sbjct 9239 GAGAAATCGAAGGTT--CCTTC--GGGACAGGGAGCAAGGTGCTGCATGGCCGTCGTCAG 9184 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| |||||| |||||||||||||||| |||||||||||||| || ||||||||| Sbjct 9183 CTCGTGCCGTGAGGTGTTGGGTTAAGTCCCATAACGAGCGCAACCCCTATACTTAGTTGC 9124 Query 241 CA--TCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGG 297 || ||| | | |||| ||||||||| ||||||| | | || | | |||||||| ||| Sbjct 9123 CAGCACATAATGGTGGGGACTCTAAGTAGACTGCCTGCG-TAAGCAGTGAGGAAGGAGGG 9065 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || || |||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct 9064 GATGAGGTCAGGTCATCATGGCCCTTATGCCCAGGGCTACACACGTGCTACAATGGCGTG 9005 Query 358 TACAAAGGGCAGCGAAACCGCG----AGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 |||| |||| ||| ||| | ||| | |||||| | |||| || ||||| Sbjct 9004 TACAGAGGGAAGC--TACCTGGTAACAGG--ATGCAAAT-CTTGAAAGCACGTCCCAGTT 8950 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC 473 ||||||| |||||||||||||| |||||| |||||||||||||||||| |||||| Sbjct 8949 CGGATTGAGGTCTGCAACTCGACCTCATGAAGTTGGAATCGCTAGTAATCGCGTATCAGC 8890 Query 474 -ATGCTACGGTGAATACGTTCCCG 496 | | ||||||||||||||||| Sbjct 8889 AACGACGCGGTGAATACGTTCCCG 8866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503407228480