Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001151.1 Length=269 Score E Sequences producing significant alignments: (Bits) Value seq37642 291 1e-76 >seq37642 Length=11267 Score = 291 bits (322), Expect = 1e-76 Identities = 233/269 (87%), Gaps = 9/269 (3%) Strand=Plus/Minus Query 2 CCGCAGAAACGCCGGGTTTCCACAGGCGTACCGGCGCCGGCCCCTTCGCCCTTCGGGCAG 61 ||||| |||||||||||| |||||| | |||||||| |||||||| |||||| ||||| Sbjct 5606 CCGCA-AAACGCCGGGTT-CCACAGATGCACCGGCGCGGGCCCCTT-GCCCTT-GGGCAA 5551 Query 62 TTCGGGCCAACAGATCGTTCGGCCTTCGGCGGAATCGGTCATAGGGCATCTCCT-GTGTC 120 || | |||||||| || || |||||| ||| ||||||||||| || |||||| ||||| Sbjct 5550 TT-GCGCCAACAGGTCATT-GGCCTT-GGCCGAATCGGTCATGCTGC-TCTCCTTGTGTC 5495 Query 121 TTACTGATCGCTCATGCCCAGCAGGCCACGGGCGTATTTGGCCAGGGGGCGGGCGATCAG 180 |||||||||||||||||||| ||||| || ||||| | |||||||| | ||||||| Sbjct 5494 TTACTGATCGCTCATGCCCAACAGGCTGCGCGCGTAGTGCGCCAGGGGCTTGCCGATCAG 5435 Query 181 GTCTTCTGGCTTGTTGTCGTGGAACGTCAGTAAACCGCCACGGCTGCGAATACGCACAGT 240 ||| || ||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 5434 GTCATCAGGCTTGTTGTCGTGGAACGTCAGTAAACCGCCACGGCTGTGAATCCGCACAGT 5375 Query 241 ATCAATCAAATACTGGGTGCTGGTCTCGA 269 ||||||||||||||||||||||||||||| Sbjct 5374 ATCAATCAAATACTGGGTGCTGGTCTCGA 5346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 761309210886