Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq24449 379 4e-103 >seq24449 Length=6126 Score = 379 bits (420), Expect = 4e-103 Identities = 320/375 (85%), Gaps = 15/375 (4%) Strand=Plus/Minus Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60 |||||||||| ||| |||| |||||||||||| ||||||||||||||| ||| |||||| Sbjct 426 GCGACGTAGA-TGT-CGTT-CGGCAGGTCTTT-GCCAGCCGGAATCTT-GCT-GTAGCT- 374 Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAAACTTCGGCCGGATTGGCCTAAAAGT 120 |||| ||||||||||||||| | | ||||| | ||| | |||||||||||||||||||| Sbjct 373 CATT-GGGCGTTGCCCCCGT--AGTTGGCCATGGAACAT-GGCCGGATTGGCCTAAAAGT 318 Query 121 TGGCGGCGATTATAGGCACATTCTGGCGCCGATGCCATTGCGCCAGAACGTCGTACGGTC 180 ||||||||||||||||| |||||| |||||||||||| ||| |||| ||||||| | Sbjct 317 -GGCGGCGATTATAGGCATATTCTGACGCCGATGCCAT-GCGTCAGA-CGTCGTAGTGCG 261 Query 181 ATTCGTCTTTGCGGCTGATAACGCGGGTCGCTGGCTTGCAGTTGGTGCAGGCGGGCCAGG 240 || | | || || |||||| ||| ||||| ||| ||||||||||||||||| |||||| Sbjct 260 CTTGG-CGTTCCGTCTGATACCGCACGTCGCCGGCCTGCAGTTGGTGCAGGCGCGCCAGG 202 Query 241 GTGTCCTGGCGATAAAAGCGGCTGAGTTGGGCGTACACCTGTGGATAACGATTGACCAGT 300 | ||||| || || ||| |||| ||||| |||||||||||||||||| |||||||| Sbjct 201 GGATCCTGACGGTAGAAGTGGCTCAGTTGCTCGTACACCTGTGGATAACTGCTGACCAGT 142 Query 301 AAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCCGGGTTTTCG 360 ||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct 141 AAATCCGGGGCACTGAAGAAATATTCGCTGGTGACGGCAAAGAACTCGGCCGGGTTTTCC 82 Query 361 GCGGCGTAGGGGTCG 375 ||||||||||||||| Sbjct 81 GCGGCGTAGGGGTCG 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097167402912