Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq9892 212 1e-52 >seq9892 Length=17670 Score = 212 bits (234), Expect = 1e-52 Identities = 258/344 (75%), Gaps = 16/344 (5%) Strand=Plus/Plus Query 2 TTTACAATCC-GAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||| || || | ||||| | | |||||||||| |||||| |||||||| ||||| Sbjct 9804 TTTACAACCCTGAGGGCCTTCATCCTG-CACGCGGCAT-GGCTGGTTCAGGCTTGCGCCC 9861 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||| |||| Sbjct 9862 ATTGACCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGCCCGTATCTCAGTGCCAG 9921 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||| |||||||||| | ||| |||||||||||||| |||| |||||| | Sbjct 9922 TGTGGGGGATCTTCCTCTCAGAACCCCTACCCATCGTCGCCTTGGTAAGCCGTTACCTTA 9981 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAA-GGTCCCCT--- 236 ||||||||||||| | | | |||||||| || | ||| ||| ||| || Sbjct 9982 CCAACTAGCTAATGGGGCGCATGCTCATCTTGTACC-----GCCGGAACTTTCCTCTTAA 10036 Query 237 --GCTTTC-TCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCA 293 | | | || || | |||| |||||| ||||||||| | | ||||| ||| Sbjct 10037 TGACATGCGTCAAAAAGAGCATATGGAGTATTAATTCCCGTTTCCGGAAGCTATCCTCCA 10096 Query 294 CTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||| ||| ||||| | || | |||| ||||||| ||||| || Sbjct 10097 GTACAAGGTAGATTGCATACGTGTTACGCACCCGTTCGCCGGTC 10140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071577492640