Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq32389 408 6e-112 seq2461 75.2 2e-11 >seq32389 Length=4120 Score = 408 bits (452), Expect = 6e-112 Identities = 248/261 (95%), Gaps = 1/261 (0%) Strand=Plus/Minus Query 1 CGATGCACGCCTTGACGCAGCGAGCCAGGACTTCTTCGCGCGCTTTTTTCGTCCAGGCCC 60 |||||||||||||||||||||||||||| ||||| | ||| ||| ||| ||||||||||| Sbjct 3467 CGATGCACGCCTTGACGCAGCGAGCCAGTACTTCCTGGCGAGCTGTTT-CGTCCAGGCCC 3409 Query 61 GGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCG 120 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3408 GGTGCCGGCGCCTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCA 3349 Query 121 CCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGG 180 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3348 CCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACCTGCACTTCCACGTGACGTGGG 3289 Query 181 TTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTCGGAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct 3288 TTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGGCAGCTTCCGAG 3229 Query 241 CGAGTCTGCTTGGCCGCTTCG 261 |||||||||||||| |||||| Sbjct 3228 CGAGTCTGCTTGGCGGCTTCG 3208 >seq2461 Length=19050 Score = 75.2 bits (82), Expect = 2e-11 Identities = 104/146 (71%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 54 CAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATC 113 ||||||||| ||||| |||||||| | || || || || || || || | ||||||||| Sbjct 2958 CAGGCCCGGCGCCGGGGCTTCTTCGACGACTTTTTGATGGCGGCGCTGGATCGAGCAATC 2899 Query 114 GCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTG 173 ||| || |||| | | ||| || || ||||| | || || | |||||||| Sbjct 2898 GCGCTCATTGAGGTACAGGCAGTGACCGTGCTGGTCGGCGAACACCTGGATCTCCACGTG 2839 Query 174 ACGTGGGTTGGTCAGGTACTTTTCCA 199 ||| || ||| || |||||||||| Sbjct 2838 ACGCGGCTTGAGCAAATACTTTTCCA 2813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735718985310