Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq37283 297 3e-78 >seq37283 Length=58456 Score = 297 bits (328), Expect = 3e-78 Identities = 208/236 (88%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 3 AGGCGCAAGCGGTACAGGCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGAT 62 |||| || ||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 26316 AGGCTCAGGCGATACAGGCGACGCTTGAG-TTTGCCCAAATACTGCATGCGCGCGACGAT 26258 Query 63 TTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAG 122 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 26257 TTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCTTGCAGGTTGAG 26198 Query 123 CATTTGCGGGATGAACAGCTCGCGGGTTTGCGCCATGACCTGGCCGATGCCGGCGCGGGT 182 ||| |||||||||||||| |||||||| || | ||||||||||||||| ||||| ||| | Sbjct 26197 CATCTGCGGGATGAACAGTTCGCGGGTCTGGGGCATGACCTGGCCGATACCGGCACGGAT 26138 Query 183 CTGGCCCAGCAGCCATTCGTTCAGACCTGCTTCTTTAAGCTGTGCAGTCAATTGGC 238 ||||||||||||||||| |||||| | |||| || | ||||| | | ||||| Sbjct 26137 CTGGCCCAGCAGCCATTGGTTCAGTTCACCTTCGTTCAATTGTGCGGCGAGTTGGC 26082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735718985310