Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001197.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq33903 136 6e-30 >seq33903 Length=8081 Score = 136 bits (150), Expect = 6e-30 Identities = 190/259 (73%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 23 GCCAGTTCGCCACAGGCCACGCTCGGTGGCTTTCTTGCGCCAGGCTGACGTGGGCAAATC 82 ||||||| |||| |||||||||||||| || | || |||||||| | ||||||| || | Sbjct 6346 GCCAGTT-GCCAAAGGCCACGCTCGGTAGCCTCCT-GCGCCAGGGTCACGTGGGGGAAGC 6289 Query 83 CGCAAAGGGCGAGGGCGCGTTGATAGCGGGCGCAAAGTGCAGCAGCGCCGACCAGGATGA 142 | || || ||| || || || ||||||| ||| ||| | | ||||||||||| || Sbjct 6288 CACAGAGTTGGAGTGCACGCTGGTAGCGGGTGCAGAGTTGGGGTGTGCCGACCAGGACGA 6229 Query 143 --TCG-GCTGATGTTTGGCC--GAATCTG-GCAAGCCGGCGAGCTCATGGCCGATGAGCA 196 ||| |||| || ||| | | || ||| ||||| || || |||||||| | || Sbjct 6228 TGTCGCGCTGCTGGCTGGGCTTGCGAGTGCGCAGGCCGGTCAGTTCGTGGCCGATCAACA 6169 Query 197 GGCCAGACAGGTAATCGGGTTGCTGGTCGGGCGCCAGCTGCGCGGTCAGCCCAAGGGTAC 256 | || ||||| || || ||||||| ||| |||||||||| |||||| || |||| | Sbjct 6168 GCCCGGACAGATAGTCCGGTTGCTCGTCAGGCGCCAGCTCGCCGGTCAATCCCAGGGAGC 6109 Query 257 GGGCACTGAACAGGGTCGA 275 | || ||||||| | |||| Sbjct 6108 GTGCGCTGAACAAGTTCGA 6090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780501880068