Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001212.1 Length=311 Score E Sequences producing significant alignments: (Bits) Value seq338 361 1e-97 >seq338 Length=5025 Score = 361 bits (400), Expect = 1e-97 Identities = 269/313 (86%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 1 TCGAGCTGTATTTTTTCACCCGCGTTTCTGGCTGTTATGGCTGGGGCTCGGCCTGCTGTG 60 |||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||| Sbjct 2136 TCGAGCTGTATTTTTTCATCCGCGCTTCTGGCTGTTATGGCTGGGGCTGGGTTTGCTGTG 2077 Query 61 GCTGGTCACCCAGTTGCCCTACCGTGCGCTGTTGACCATTGGTCGCCTGC--TGGGTGCG 118 |||| | |||||||| ||||| || | || ||||| || ||| |||| ||| Sbjct 2076 GCTGATTGTGCAGTTGCCGTACCGGGCTTTACTGGGGATTGGCCG--TGCCTTGGGGGCG 2019 Query 119 GGGATGTACCGTGTGGCCGGCGAACGCCGCCGCATCGCCGCGCGAAACCTGGAACTGTGC 178 || |||||||| |||||||| ||||| || || |||||||| |||||||||||||||||| Sbjct 2018 GGAATGTACCGGGTGGCCGGTGAACGTCGACGTATCGCCGCACGAAACCTGGAACTGTGC 1959 Query 179 TTCCCGGAAAAATCCGCGAAAGAGCGTAAACATTTGCTTAAAGAAAACTTTGCCTCCACC 238 ||||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct 1958 TTCCCGGAAAAGTCCGCTAAAGAGCGTAAACATTTGCTCAAGGAAAACTTTGCCTCCACC 1899 Query 239 GGCATCGCCTTCTTTGAGATGGCCATGAGCTGGTGGTGGTCGCGCCAGCGCCTGGCGCGC 298 |||||||| ||||| |||||||||||||||||||||||||| | ||||||||||||| Sbjct 1898 GGCATCGCGTTCTTCGAGATGGCCATGAGCTGGTGGTGGTCCAAGCCGCGCCTGGCGCGC 1839 Query 299 CTGGCCCACGTCG 311 |||||||| |||| Sbjct 1838 CTGGCCCATGTCG 1826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 892448120736