Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001228.1 Length=576 Score E Sequences producing significant alignments: (Bits) Value seq2445 497 4e-138 >seq2445 Length=2741 Score = 497 bits (550), Expect = 4e-138 Identities = 467/594 (79%), Gaps = 22/594 (4%) Strand=Plus/Plus Query 3 ACCCCGAGGTCACGGCGGCCGACCTGAAGCTGGCCCTGGCCGAGATGGAGCAGTTCTACG 62 |||||| | ||| || | ||||| |||| |||||| |||||| ||||||||| | Sbjct 136 ACCCCGGGATCAGCGCCGAGGACCTCAAGCAGGCCCTCGCCGAGCGCGAGCAGTTCCTGG 195 Query 63 ACGTGCAACCGTCTGAGCTTGAGCAGCTCGATCCACGCG-GCGCAGGGCCATGCACGGCG 121 |||| ||| || || || |||| |||||| || ||| || | |||| ||||| Sbjct 196 ACGTTACCCCGCAGGAACTGGAAGAGCT-GATCCAGGCCAGCG-AGCGGTATGCCCGGCG 253 Query 122 GCGCAGCATCGGCGAGGTGCTC-------------AGTCGCCGT------GCATAAATGC 162 ||||| |||||||| ||| || || | || ||| |||||| Sbjct 254 GCGCACCATCGGCGCGGTTTTCCAGCACCAGGGCCAGCCTCCTCCATAAGGCAAAAATGC 313 Query 163 AATAACGACCTGCAGGATTCCCCGGTGTACTGGGCAAATGTGCACTGGTAGGATCGCAAG 222 || ||||||||||| |||||| |||||||||||||| |||||||||| |||||| || Sbjct 314 AAAAACGACCTGCATGATTCCGACTTGTACTGGGCAAATTTGCACTGGTACGATCGCGAG 373 Query 223 AAGGTTCGTCCCCGAACATCTTGATAAAGAACAATAAAAGCAGGGAGTTAGCGATGACTG 282 | |||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 374 ATGGTTCGCCCGCGAACATCTTGATAAAGAACAATAAAAGCAGGGAGTTAGAGATGACTG 433 Query 283 CTCAGGTTTCATCCGAGGCAAGCCACACCGACCATCTTCAAGCCGACATACTCGCCGAAG 342 ||||||||||||||||||||||| | ||| | | |||| ||| | || || | | Sbjct 434 CTCAGGTTTCATCCGAGGCAAGCAGCGCCGGGATTGTGCAAGACGAGGTCCTGGCGCACG 493 Query 343 TCCGCAACCATATCGGCCACCTCACCCTCAACCGCCCCGCCGGCCTGAACGCCATTACCC 402 | ||||||||||| |||||||| |||||||| |||||||| ||||| |||||| | |||| Sbjct 494 TACGCAACCATATTGGCCACCTGACCCTCAATCGCCCCGCAGGCCTTAACGCCCTCACCC 553 Query 403 TGGACATGGTCCGCAGCCTGAGCCACCACCTGCAGGCCTGGGCCGACGATCCCACGGTGT 462 ||||||||||||||||||| |||| || ||||||| ||||| ||||||||| |||| Sbjct 554 TGGACATGGTCCGCAGCCTCAGCCGGCATTTGCAGGCGTGGGCGGACGATCCCCAGGTGC 613 Query 463 ATGCCGTGGTCCTGCGCGGCGCCGGGGAAAAAGCCTTCTGCGCGGGCGGCGATATCCGTT 522 |||||||||| ||||||| ||||| ||||||||||||||||| |||||||| || || | Sbjct 614 ATGCCGTGGTGTTGCGCGGTGCCGGTGAAAAAGCCTTCTGCGCCGGCGGCGACATTCGCT 673 Query 523 CCTTGCATGACAGTTTCAAGAGCGGCGACACCCTGCACGAAGACTTCTTTGTCG 576 | || | ||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct 674 CGCTGTACGACAGCTTCAAGAGCGGCGACACCCTCCACGAAGACTTCTTCGTCG 727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1740113898496