Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001262.1 Length=237 Score E Sequences producing significant alignments: (Bits) Value seq23268 280 2e-73 >seq23268 Length=30962 Score = 280 bits (310), Expect = 2e-73 Identities = 194/213 (91%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 24 TCGAGATCCAGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGGCCGAATGGCGTC 83 |||||||| |||||||| |||||||||||||| |||||||||||||| |||| ||||||| Sbjct 22672 TCGAGATC-AGGAACGCAGCGGTCTTGCCGGTACCGGTCTGGGCGCGACCGA-TGGCGTC 22615 Query 84 TTTTGCCGGCCAGGGTGAAACCCAGCACCTAGCGCCTTGGATCGGCGTGCAGTACGGGAA 143 ||| |||||| |||||||| |||||||| | |||||| |||||||||||||||||||||| Sbjct 22614 TTT-GCCGGCGAGGGTGAAGCCCAGCACTT-GCGCCT-GGATCGGCGTGCAGTACGGGAA 22558 Query 144 ACCCAGGTCCTGGATGGCGTGCATCAGTTCCGGGGCCAGTTTGAAATCGTGGAAGCGGGT 203 |||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||| Sbjct 22557 ACCCAGGTCCTGGATGGCGTGCATCAGTTCTGGGGCGAGCTTGAAATCATGAAAGCGGGT 22498 Query 204 CTTGCCTTCCTGGGGCTCGACGACGAAGTCTTC 236 |||||||||||||| ||||| ||||||||||| Sbjct 22497 TTTGCCTTCCTGGGGTTCGACAACGAAGTCTTC 22465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658948308582