Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001305.1 Length=327 Score E Sequences producing significant alignments: (Bits) Value seq24882 437 2e-120 >seq24882 Length=9405 Score = 437 bits (484), Expect = 2e-120 Identities = 294/327 (90%), Gaps = 1/327 (0%) Strand=Plus/Plus Query 1 TCGAAGGGGCTACGCTGTTCAAGTTCATGGTGACGATGGAACGCGCCGAAGAACGCTTTA 60 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 6784 TCGAAGGGGCTACGCTGTTCAAATTCATGGTGCCGATGGAACGCGCCGAAGAACGCTTTA 6843 Query 61 ATACATTGGAGGCGTTGTTTGAGCGCCTCATTCCGCAAATCCGTATGAAGGACGCCCCAA 120 ||||| |||||||| |||||||||||||||| ||| ||||| | ||||||||||||||| Sbjct 6844 ATACACTGGAGGCGCTGTTTGAGCGCCTCATCCCG-AAATCTGCTTGAAGGACGCCCCAA 6902 Query 121 TGCGCCTGTTCCGCATTTTGAGCCTGTTGTTGGTGGTCGTGGCACCTGCGGCATTCGCCG 180 ||||||||||||||||||||||| |||||||||||||||| || ||| |||| ||||||| Sbjct 6903 TGCGCCTGTTCCGCATTTTGAGCTTGTTGTTGGTGGTCGTTGCGCCTTCGGCGTTCGCCG 6962 Query 181 ACAGCCCGTACCAGGTGGAAATGATCCTCGTGCGCCAGAACGCCGAGCCGGTGATCAACA 240 |||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 6963 ACAGCCCGTACCTGGTGGAGATGATCCTGGTGCGCCAGAACGCCGAGCCGGTGATCAACA 7022 Query 241 GCCGCGCCGCGCCGGAAAACTGGGATGCCGGGGCCGTGCGCCTGGGCTCCGACAAACTGA 300 |||| || ||||||||||||||||| ||||| || |||||||| | |||||| ||| Sbjct 7023 GCCGTGCGGCGCCGGAAAACTGGGACGCCGGCGCACCACGCCTGGGGACTGACAAAATGA 7082 Query 301 GCCCGCCACGCCTGAACAATATCGTCG 327 |||||||||| ||| |||||| |||| Sbjct 7083 GCCCGCCACGACTGGGCAATATTGTCG 7109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943627941280