Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001383.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value seq11162 533 5e-149 >seq11162 Length=25470 Score = 533 bits (590), Expect = 5e-149 Identities = 457/562 (81%), Gaps = 2/562 (0%) Strand=Plus/Minus Query 1 TCGACCCTGATTTTAAACACGGTCTGGGCATATTTGCGCCCAATCCCACTTTATAGTGCT 60 ||||||| || || || |||| || ||||||| || ||||||| | | || Sbjct 21512 TCGACCCAGAAGTTGCCCAAAGTCTTGGTGGATTTGCGACCGATCCCACGGCACAACGCG 21453 Query 61 TACCATCACGGACAGGACTGTCGCGTTGTTGACGAAGTTCTGCTCCGTGAGGACGGCCAT 120 |||| |||| ||| | || ||| |||||||||||||| | |||||| || |||| Sbjct 21452 -ACCAGTACGGCGAGGCCGGTGGCGGCACTGACGAAGTTCTGCACGGTGAGGCCGACCAT 21394 Query 121 CTGACTTAGATAATTTAAGGACGCCTCACCGCTGTTGTTCTGCCAGTTGGTATTGGTCAT 180 |||||| || || | | |||||| |||||||||| ||||||||||||||| |||||||| Sbjct 21393 CTGACTGAGGTAGCTCAGGGACGCTTCACCGCTGTAGTTCTGCCAGTTGGTGTTGGTCAT 21334 Query 181 GAAACTGACGGCGGTATTAAACGCCTAGGTCCATTCCTGGCCCGGCAGGTTTTGCGGGTT 240 |||||||| |||||| || |||||| |||||||||||| ||||||| || |||||||| Sbjct 21333 GAAACTGATGGCGGTGTTGAACGCCAGGGTCCATTCCTGACCCGGCAATTTCTGCGGGTT 21274 Query 241 CAGCGGGAGGGAGCCTTGAAATAACAGAATAGAGAACAGCAGCAGGAAGCCGGCGAGGTT 300 |||||| ||| | | || || | ||| || | ||||||||||| ||| ||||| ||||| Sbjct 21273 CAGCGGCAGGTATTCCTGGAACAGCAGGATCGCGAACAGCAGCACGAAACCGGCAAGGTT 21214 Query 301 GAATGCGAGCAAGGCCAGCATGTACTTCTGCCAGCTTTGTTCCTGCTGTGCGTCCACACC 360 ||| || ||||| |||||| ||| ||||||||||| |||||||| | ||| || ||||| Sbjct 21213 GAACGCCAGCAACGCCAGCGCGTATTTCTGCCAGCTCTGTTCCTGGTCTGCATCGACACC 21154 Query 361 CGACAGGCGATAACAGGCGCTTTCCACCGGCCCCAGCACCGGGCTGAGCCAGGTGCGCTG 420 ||| |||||||| || ||| || ||||| || | |||||| |||||||||| ||||| Sbjct 21153 CGAAAGGCGATAGCACACGCGCTCGACCGGGCCGAACACCGGCGTGAGCCAGGTTCGCTG 21094 Query 421 GCCCTCCATCACCTTGTAGTAGAACCGCCCCAGGAACGGAGTCGGCACCAGTACCACGGC 480 || ||||| |||||||||||||||||||||||| ||| | ||| | ||| |||| ||| Sbjct 21093 CCCTTCCATTACCTTGTAGTAGAACCGCCCCAGGGCCGGTGCCGGAATCAGCACCAAGGC 21034 Query 481 AAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCC-GCTCCTAGTTCCGATC 539 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 21033 AAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCCTGCTCCTAGTTCCGATC 20974 Query 540 CGCGCGTAACAGCGCAACCAGC 561 |||||||||||||||||||||| Sbjct 20973 CGCGCGTAACAGCGCAACCAGC 20952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1692132816736