Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq7857 509 4e-142 >seq7857 Length=5948 Score = 509 bits (564), Expect = 4e-142 Identities = 350/395 (89%), Gaps = 0/395 (0%) Strand=Plus/Minus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1291 CGATGGCACCGGCCCGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATCGC 1232 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 1231 CTGTGGCGCGGTCTCGGGTTTCCACGCACTGATCTCCTCGGGCACCACGCCCAAGTTGCT 1172 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 |||||||| | || |||||||||||||| |||||||||||| |||||||||||||||| Sbjct 1171 GGCCAGTGAAGGGCACGCCCGTTACATCGGCTACGGCGGCATGTTGATGGAGTCGTTCGT 1112 Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAA 240 |||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||| Sbjct 1111 GGCCATCATGGCGATGGTTGCCGCTTCGGTGATCGAGCCAGGGGTGTACTTCGCCATGAA 1052 Query 241 CAGCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGCGCAAACCGTCAGCAGTTG 300 ||||||||| || ||||||||| |||||||| | |||||||||||||||||||| || Sbjct 1051 CAGCCCGGCCGCGATTGTCGGCGGTGACGTGGTGGCTGTGGCGCAAACCGTCAGCAGCTG 992 Query 301 GGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGTGAAACCAC 360 ||| ||||| ||||| || || ||| || ||| || ||||| | || ||||| |||| Sbjct 991 GGGTTTTGCAATTACCCCGGAAGCGTTGCAGGCGGTGGCCCATGACATTGGTGAGTCCAC 932 Query 361 CATCCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395 ||||||||| ||||||||||| ||||| || |||| Sbjct 931 CATCCTGGCCCGTGCCGGCGGTGCGCCAACCCTGG 897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161142178592