Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001493.1 Length=345 Score E Sequences producing significant alignments: (Bits) Value seq12340 154 3e-35 >seq12340 Length=5348 Score = 154 bits (170), Expect = 3e-35 Identities = 180/242 (74%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 107 TCCAGAGTGCGGTGAGGTCGGGGTTGAGCGTGGCGAGGAATTGCAGGCGCACGGCTTTGT 166 |||| || ||| ||||| ||||||||| ||||| |||||||||||||||||| || | Sbjct 1057 TCCACAGCGCGTCCAGGTCCGGGTTGAGCTGGGCGAAGAATTGCAGGCGCACGGCCTTTT 998 Query 167 TGTCGACGCGGTCGTAATCCTTGTCGTCGTAGACGTTCTTGATAAAACCGTCGCGCTCCT 226 ||| |||| | |||| | |||||| | ||| || ||||||||||| |||| Sbjct 997 TGTTGACGTCGCCGTAGGTGTGATCGTCGATCAGGTTTTTCTGGAAACCGTCGCGTTCCT 938 Query 227 TGGAATACAGCGACACGCGGGCGGCCAGGCGGTCTTCC---ACCAGGGTGCCGCCGATGG 283 ||| |||||||| | || || || || | |||| ||||||||||||||||||| Sbjct 937 CGGAGTACAGCGAGATCCGCGCCGCGAGT---TTTTCCGGAACCAGGGTGCCGCCGATGG 881 Query 284 CGCCATTGACGATTTTCTCGTTCTTGCTGCCGTAGCCAAGGGTGGCGTAGCCGTCGTTCT 343 |||| |||||||| |||||||||||||| | || | ||| | ||||||||| | | Sbjct 880 CGCCGTTGACGATGCGTTCGTTCTTGCTGCCAAAACCGATCGTGCCATAGCCGTCGGTGT 821 Query 344 CG 345 || Sbjct 820 CG 819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1001205239392