Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001575.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq2441 217 2e-54 seq37709 84.2 3e-14 >seq2441 Length=4501 Score = 217 bits (240), Expect = 2e-54 Identities = 188/231 (81%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34 GGTCAAGCCACAGGTTATGGCGGCCCGGCCCACCGCAGCCCATGGTCAGGGCGCCCAGTT 93 |||| ||||| || || |||||||| ||||| |||||||||||||||||||||||||||| Sbjct 4501 GGTCGAGCCATAGATTGTGGCGGCCGGGCCCGCCGCAGCCCATGGTCAGGGCGCCCAGTT 4442 Query 94 TGAGCTGTCTTTTA---GTCATTGCGCA-GTAGTCCTTCAAGCGGTCAGGGCTGGGTGGT 149 ||||||||||||| ||||| | | ||| ||||| ||||| ||||||||| | | Sbjct 4441 TGAGCTGTCTTTTTTGGGTCATGTCTGACGTATTCCTTGAAGCGTTCAGGGCTGAATTTT 4382 Query 150 GACGACGGCGGGTTGCAAGGCGGCCGCGAATGAAGGGTCAAACAACGTGGCGGCCGAGTA 209 | ||||||| || ||||||| |||||||| || ||| |||| | |||| |||| ||| Sbjct 4381 GGCGACGGCAGGCTGCAAGGACGCCGCGAAGGAGTCGTCGAACAGCTTGGCTGCCGGGTA 4322 Query 210 AGACTTGACCAGACCCAGGCCGGCAAAAAAGTCCACGGTCTTTTGCGCCTC 260 |||||||||||| ||| ||| || |||||||||||||||||||| || || Sbjct 4321 AGACTTGACCAGTCCCTGGCTTGCGAAAAAGTCCACGGTCTTTTGTGCTTC 4271 >seq37709 Length=6191 Score = 84.2 bits (92), Expect = 3e-14 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 1 CGACGTTGACGCTGGCATCGGCCGGCAATTGCGGGTCAAGCCACAGGTTATGGCGGCCCG 60 ||||||||||||||||||||||||||| ||| ||||| ||||| || || |||||||| | Sbjct 6128 CGACGTTGACGCTGGCATCGGCCGGCAGTTGAGGGTCGAGCCATAGATTGTGGCGGCCGG 6187 Query 61 GCCC 64 |||| Sbjct 6188 GCCC 6191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735718985310