Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001590.1 Length=402 Score E Sequences producing significant alignments: (Bits) Value seq24276 228 2e-57 >seq24276 Length=1022 Score = 228 bits (252), Expect = 2e-57 Identities = 262/350 (75%), Gaps = 2/350 (1%) Strand=Plus/Minus Query 1 CGAGGACATCTACAGCCGAAAGGCCGTGGGCTGGGAAGTTTACGAGCAAGAAAGTGGCGA 60 ||| || ||||||||||||||||| |||||||||||||||||||| ||||||||| || Sbjct 599 CGAAGATATCTACAGCCGAAAGGCGGTGGGCTGGGAAGTTTACGACGTAGAAAGTGGTGA 540 Query 61 GCTGGCGGCCGAACTGATGCAGCGCACCGTGCTCACCGAACGCTGCGCCGGACGGCCCTT 120 || || | | | |||| || | |||| | |||| ||| | | ||| | Sbjct 539 AAAAGCAGCAGTATTACTGCAACGAAGCGTGACCCAGGAACAGTGCTGGCGCCAGCCGCT 480 Query 121 AGTGCTGCACTCGGACAACGGTGCACCGATGAAATCGGTGACGTTGCTGAGCAAACTGTA 180 ||||||||||| |||||||| || |||||||| ||||||||| |||||| ||| |||| Sbjct 479 GGTGCTGCACTCTGACAACGGCGCGCCGATGAAGTCGGTGACGCTGCTGACCAAGATGTA 420 Query 181 CGAACTCGGCATCACCCCGTCACGCGGACGACCACGGGTGAGTAACGATAATCCCTACTC 240 ||| || |||||||| || || || || ||||| ||||| || || || || || || || Sbjct 419 CGATCTGGGCATCACGCCATCTCGTGGTCGACCGCGGGTCAGCAATGACAACCCGTATTC 360 Query 241 AGAATCGCTGTTTAGAACCCTGAAATATTGCCCGCAATGGCCTCCTGGTGGTTTT-GCAG 299 ||||| ||||| || || |||||||| |||||||| ||||| | | ||||||| |||| Sbjct 359 GGAATCACTGTTCAGGACGCTGAAATACTGCCCGCAGTGGCCACTAGATGGTTTTAGCAG 300 Query 300 ATTTGGACGCGGCACGCAGCTGGGTGCGCGATTTTATCCGCTGGTACAAC 349 |||| | || || |||||| | || ||||| |||||||||| Sbjct 299 -CCTGGATGATGCGCGTGTTTGGGTGAGGGACTTTATGACCTGGTACAAC 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183533350080