Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001616.1 Length=254 Score E Sequences producing significant alignments: (Bits) Value seq24885 315 1e-83 >seq24885 Length=27811 Score = 315 bits (348), Expect = 1e-83 Identities = 222/254 (87%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 1 CGAACACATGGTTGAGCAGAAAATCGCGGCTCAGCGGGCGGTTCGGGTGCTGCAAGAGCA 60 ||||||| |||||||||| ||| |||||||||||||| ||||| || |||||||| | || Sbjct 19453 CGAACACGTGGTTGAGCAAAAAGTCGCGGCTCAGCGGCCGGTTGGGATGCTGCAACAACA 19512 Query 61 GGCGCAGCGCGCGGTAATCCGAATTGCCCAGGCTGACCACCACACCGTCCGGCGAAAGCA 120 |||||| | | |||||||| || ||||| |||||||||||||| || ||||||||||||| Sbjct 19513 GGCGCAACACCCGGTAATCGGAGTTGCCGAGGCTGACCACCACGCCTTCCGGCGAAAGCA 19572 Query 121 ATTGGCGCGCCCGGGTGTCGAGTTGCCAGCCGGCGAAACGGATGCTCGGCGCTTCATCCA 180 ||||||| ||||||||||| || ||||||||||| || | ||||||||| |||||||| | Sbjct 19573 ATTGGCGGGCCCGGGTGTCCAGCTGCCAGCCGGCAAAGCTGATGCTCGGTGCTTCATCGA 19632 Query 181 GTCGCGCCCGGTCGGGACAACTCTGCACCCGGCGCAATACCACCTTGATCCGCACCAACA 240 | ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| || Sbjct 19633 GCCGCGCCCGGTCCGGAAAACTCTGCACCCGGCGCAGCACCACCTTGATCCGCACCAGCA 19692 Query 241 GTTCCCGCGGGTCG 254 |||||||||||| Sbjct 19693 ACTCCCGCGGGTCG 19706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 713327537931